Medicago truncatula (barrel medic): 11426905
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Entry
11426905 CDS
T01716
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11426905
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
General mRNP proteins
11426905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
11426905
NCBI-ProteinID:
XP_003630170
UniProt:
G7LC87
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All DBs
Position
8:42850503..42856635
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AA seq
567 aa
AA seq
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MDFDEYEYLEKTVEEQPEDKDSSKKKNTDITDIKSERTYRKHGIDDDLDGGEDRRSKRSR
GGDDENGSKKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGRDKERD
REREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDRGERDFENRD
GRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR
RSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGA
VDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAA
QSLNGKLEIAGRTIKVSSVTDHVGSQDTTTKSADFDDDEGGLTLNAHSRALLMQRLAGTD
ITTSIGVPTVNGSVPVQQAFSMPFGNPGVIPASVLPTQVMPTPVAEPVGIPSECLLLKNM
FDPSTEIEPDFDIDIKEDVEEECSKYGRVMHIYVDKRSAGFVYLQFETVEASSAAQRAMH
MRWFARRLITAIFMQPHLYEAKFKDES
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtacttggagaagacggtggaggagcaaccggaagacaag
gattcatccaaaaagaagaacactgatatcaccgacattaaatccgagaggacttaccgg
aagcacggcatcgacgacgatctcgacggcggcgaagataggcggagcaagaggtcacgc
ggcggagatgacgagaatggctctaagaaggatcgcgatagagacagagaccgtgaacgt
gaccgagaacaccgcgaacgatcttccggtcgtcaccgggagagggacggagagagaggt
agtagagagaaagagagggagaaggacgtagagagaggtgggagagataaggagagggat
agggagagagaaaaggagagggagaggagagataaggaaagggaaaaggaacgggagaga
agagataaggagagagagaaggagcgtgctgagagagaaaaagaggagaaagagagacca
aggaggagtatgagtcgtcctgagagagacagaggagagcgagatttcgaaaacagagat
ggcaggagattcagggataagaaagagaatgtggaacctgaggcagacccagaaagggat
cagagaactgtttttgcctaccagatgcccttaaaagcaacggagagagatgtatacgag
ttcttctcaaaagctggcaaggtgagagatgttcgtctgatcatggataggaactcaaga
cgatctaaaggagttgggtatattgaattttatgatgcgatgtcagtgccaatggcaatt
gctctctctggccaactacttcttgggcaacctgtaatggtgaaaccttctgaggccgaa
aaaaatcttgttcaatctaatgcttccagtggagctgctgtagtaggaccatatggagca
gtggacagaaaattgtatgtggggaatcttcacttcaacatgactgaggctaatctgcga
gagatttttgagccatttggtcagattgaggttgtacaacttcctcttgacatggagacg
ggacactgcaagggttttgggtttgttcaatttgcccatcttgaacatgcaaaggcagct
cagagtttaaatgggaaattggaaattgctggcaggactataaaggtttcatctgttaca
gatcatgttggaagtcaggatacaactacaaagtctgcagactttgatgatgatgaagga
ggattgaccttaaatgcccactcaagggcactgcttatgcaaagattggctggtactgac
attaccacaagcattggtgtgccaactgtgaatgggtcggttcctgttcagcaggctttt
agcatgccttttggcaatccaggtgttatacccgcgtcagttctaccaacacaagtcatg
cctacccctgtcgcagaaccagtaggaattcccagcgagtgtttattattgaagaatatg
tttgatccaagcactgagatagaaccagattttgatatagacataaaagaggatgtagag
gaagagtgttctaaatacggccgggtgatgcacatttatgttgacaaaagaagtgcaggt
ttcgtttacttgcagtttgaaacagtggaagcatcaagtgctgcacaacgagcaatgcac
atgagatggtttgcacgcaggttgatcacagctatcttcatgcaaccacatttatatgaa
gccaaatttaaggacgaatcttga
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