Medicago truncatula (barrel medic): 11426986
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Entry
11426986 CDS
T01716
Name
(RefSeq) alpha-L-arabinofuranosidase 1 isoform X5
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00520
Amino sugar and nucleotide sugar metabolism
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
11426986
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
11426986
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
TIG
Motif
Other DBs
NCBI-GeneID:
11426986
NCBI-ProteinID:
XP_024626197
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Position
7:40959852..41003690
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AA seq
646 aa
AA seq
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MFNAFLFSLIVCLVISECHADVNANASHISKLEIDARTRRPIPDTFFGAFFEEINHAGAG
GLWAELVDNRGFEAGGSNVSSNINLWTIIEDNSSSIIVSTDRSSCFERNKVALRLDVLCQ
GQSCPLGGVGISNPEFWGMNIEQGKKYKVVFYVRSLGPINLQVSFIGSDDGVKLASTNIS
AFGVNVTKWSRMETILEANGTNHNSSLQITTSNRGVVWLDQVSAMPLDTYKGHGFRSDLY
QMAADLKPKTFRFPGGCYVEGDYLRNAFRWKDTVGPWEERPGHFNDIWNYWTDDGFGYFE
GLQLSEDLGAFPVWVFNSGISHHDEVNTSDISPFVQEALDGIEFARGSSTSQWGSLRASM
GHPEPFDLRFVAIGNEDCHKYNYLGNYLKFYEAIKHDSPDIQIISNCDGSIHQLDHPADL
YDFHIYTDSKDIFSDHTKFDNAPRSGPKAFVSEYAVWKEDAGAGSLYAAVAEAAFLIGLE
KNSDIVSKVAYAPLFLNTNDRKWIPDTIVFNSYQNYGTPSYWLQQLFIESSGATLLNSTL
QNSSSSIVASAIEYKNSQDGKNYLRVKVVNFGNATENFMILINGLNSTVQSSNSSMVVLT
SSNRMDENSFSELNKIVPQRTALGNASNDMDVRLPPYSVTSFDLSI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgcttttcttttctctttgattgtgtgtttggtcatttctgaatgtcacgct
gatgttaatgctaatgctagccatatatcaaaattagagattgatgcacgtactagaagg
cctattccagacacattctttggagcattttttgaggaaattaatcatgcaggagctggg
ggattgtgggcagaacttgtggataatagaggttttgaagcaggaggttccaatgtttca
tcaaatattaatctatggactattattgaagataattcatcatcgattatcgtatcaact
gatcgttcctcttgttttgagcgtaataaggttgctttacgtttagatgttctttgtcaa
ggacaatcatgtccacttggtggtgttggtatctccaatcctgaattttggggcatgaac
attgagcaagggaaaaagtataaagtggtgttctatgttagatcacttggtcctattaat
ttacaagtttcatttatcggatctgatgatggtgtaaaattggcttcaacaaacataagt
gcttttggagttaatgttacaaagtggagtaggatggagacaattcttgaagctaatggt
acaaatcataattcaagtctacaaataacaacaagcaatagaggggtagtatggttagat
caagtgtcagctatgcccttggatacatataagggtcatggttttcgaagcgacctttat
caaatggcggcagatctcaagccaaaaacttttagattcccaggtggttgttatgtagaa
ggagattatctgagaaatgcatttagatggaaagatacagttggaccatgggaagagaga
cctggccactttaatgacatatggaattattggactgatgatggatttggttattttgag
gggcttcaactatcagaggatcttggtgcattcccagtgtgggtgtttaacagtggtatt
agccatcatgatgaagttaatacgtctgatatttcaccatttgtgcaagaagccctagat
ggtattgagtttgctagaggttcttccacatcacaatggggttctcttagagcttccatg
ggacatcctgagccatttgatttgagatttgttgccattggaaatgaagactgtcataaa
tataactatctaggaaactacctaaagttctatgaagctataaaacatgattctcctgat
attcaaattatctcaaattgtgacggttctatacatcaattagatcacccagcagatctc
tatgattttcatatttatacagattctaaggacatattttccgatcataccaagttcgat
aacgcaccaagatccggtccaaaggcatttgttagtgagtatgctgtttggaaggaagat
gctggtgctggaagcctttatgcagctgttgctgaagctgcatttctcattgggcttgaa
aagaatagtgatattgttagcaaggttgcatatgcaccactctttttaaacacaaacgac
agaaagtggataccagatacaattgtttttaactcttatcagaattatggaactccaagt
tattggctacaacaactctttattgaatctagtggagcaacattgcttaattcaactctt
caaaattcttctagctcaattgttgcatccgcaattgagtataaaaattctcaagatggg
aagaattatctaagagtaaaggtagtcaactttggaaatgccactgagaacttcatgatt
ttaataaatggtttaaattcaactgttcaatcgtctaattcatcaatggtggtgcttacg
tcctccaatagaatggatgagaattccttctcggagctaaataagattgtgccccaaaga
actgcacttggaaatgcaagcaatgacatggatgttagacttcctccttattcagttaca
tcatttgatctatcaatctaa
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