KEGG   Medicago truncatula (barrel medic): 11427003
Entry
11427003          CDS       T01716                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11427003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11427003
   03041 Spliceosome [BR:mtr03041]
    11427003
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     11427003
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     11427003
Spliceosome [BR:mtr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    11427003
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 11427003
NCBI-ProteinID: XP_003601524
UniProt: G7J8U4
LinkDB
Position
3:40747275..40751097
AA seq 352 aa
MASRKSDNPHSGDGASPGKIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRG
FGFITYADASVVDQVIQENHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSED
ELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVEIK
KAEPKKSSNSSSFPSFGSDSRARSYNGGFGGFDDSYGSFPGGGYGPASYRSLGGIGGRFS
DYGGYGGGDDFSGGFGGYGGSGGAGGYAGYRGGESSFGYSGRYGSYMGGLGGGYGGGGLG
PYGRGGGYGSYGGPGTGGGYESGPGTGFGGTGGPYSSRGGYGGSSRYHPYTR
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcttcaagaaagtccgataaccctcactccggcgacggcgccagtcccgggaaaatc
ttcatcggaggtttagccaaagacacaaccctagaggagtttgtgaagtactttgaaagg
tacggagagataacggattccgttatcatgaaagatcggcataccggccgtcctcgagga
ttcgggtttatcacttatgcggatgcttctgttgttgatcaagttattcaggagaatcac
atcatcaatgacaagcaggttgaaatcaagaggactattccaaagggtgcatctcaaact
aatgacttcaaaactaagaagatttttgttggtggcattccagcaactgtatctgaagat
gagctcaagatcttcttctcgaagcatgggaatgttgtggagcatgagataatacgcgac
cacaccactaagcgttctcgtggatttggctttgtcgtttttgatagtgataaggctgtt
gataatttgttagctgatgggaacatgattgatatggatgatactcaggttgagatcaag
aaggctgaaccaaagaaatcttcaaattcatcttcttttccttcatttggtagtgattct
agggcacgttcttacaatggtggttttggtggatttgacgattcttatggaagttttcct
ggcggaggttatggccctgcatcttataggtcgcttggaggtattggtggtaggtttagc
gattatggtgggtatggaggtggagatgatttcagtggtggttttggaggttatggaggc
agtggtggtgctggtggttatgcgggatatagaggaggagaatcctcattcggttactct
ggccgttatggatcctacatggggggccttggtggtggatatggtggtggtgggttaggc
ccatatgggagaggtgggggctatggaagttacggtggtccaggcactggtggaggttat
gaatctggccctggtactggttttggtgggacaggaggaccctattctagtaggggaggt
tatgggggcagtagtcgttaccatccttacacaagatag

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