Medicago truncatula (barrel medic): 11427208
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Entry
11427208 CDS
T01716
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11427208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11427208
03041 Spliceosome [BR:
mtr03041
]
11427208
03032 DNA replication proteins [BR:
mtr03032
]
11427208
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
11427208
Spliceosome [BR:
mtr03041
]
Complex A
U1 snRNP components
Sm proteins
11427208
U2 snRNP components
11427208
Complex B
U1 snRNP components
11427208
U4/U6.U5 tri-snRNP components
11427208
Complex C
U2 snRNP components
11427208
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
11427208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
11427208
NCBI-ProteinID:
XP_003597961
UniProt:
G7IMA2
LinkDB
All DBs
Position
2:51248268..51250325
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
NVKKKSKKTLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaccaaagttcaaagggtcatgacccaacccattaacttgatcttcagattt
cttcaaagcaaagcgcggattcagatttggctttttgagcaaaaggatttgaggattgaa
ggaagaatcattggttttgatgaatacatgaatttggttttggatgatgctgaagaagta
aacgtcaagaagaagagcaaaaagacactagggaggatccttcttaaaggagataacata
actttgatgatgaacacgggtaaatga
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