Medicago truncatula (barrel medic): 11427220
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Entry
11427220 CDS
T01716
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11427220
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
11427220
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
11427220
Prokaryotic type
11427220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Methyltransf_24
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
11427220
NCBI-ProteinID:
XP_003597704
UniProt:
G7IUN1
LinkDB
All DBs
Position
2:49704512..49710554
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AA seq
950 aa
AA seq
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MAQILNFRNFLFLPSYKPTTHFRLRFLSTLVSSSSRRSNINAPPLHLRRRSTTTSTTPME
VEENSSVGFNKRRAEGTENSGLPKKNLQLKVRKLNPINTISYVQVLGTGMDTQDTSPAVM
LFFDKQRFIFNAGEGLQRFCTEHGIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGMGDEG
MTVNVWGPSDLKYLVDAMRSFIPNAAMVHTKSFGPTFGTESTVKSQSDPIVLVDDEVVKI
SAIILQPCQIPSQKTDHSIDIADSLNGKKLLAAKPGDMSVVYVCELPEIQGKFDPEKAKA
LGLRPGPKYRELQLGNSVESDRQKNVMVHPSDVMDPSIPGPVVLVVDCPTESHLEALLSA
KSLDTYGDQVGNLPKAGKSVSCVIHLTPESVVCCSNYQNWMKTFSSAQHIMAGHEKKNIE
VPILKASARIATRLNYLCPRFFPAPGFWSLPNQNCSKPVSLASSEDSFSAPSNVIYAENL
LKFTLRPYVNLGLDRSCIPPKASSSEIIDELLLEIPEVVEAAQHVRQLWEDSSQAKEDSI
PLADHSEVIEEPWLSEDGITPACLENIRRDDLEIVLLGTGSSQPSKYRNVTSIYINLFSK
GGLLLDCGEGTLGQLKRRYGVSGADDVVRSLSCIWISHIHADHHTGLTRILALRRDLLKG
VPHEPVLVVGPRMLKRYLDAYHRLEDLDMLFLDCKHTFEASLADFENDLQETVNSLDLNN
NNAEINASKVDSTLFARGSPMQSLWKRPGSPVDKDTVYPLLRKLKGVIQEAGLNTLISFP
VVHCSQSYGVVLEAEKRINSVGKVIPGWKIVYSGDTRPCPELIKASRDATVLIHEATFEE
GMVLEAIARNHSTTNEAIETGEAANVYRIILTHFSQRYPKIPVINKEHMDITCIAFDLMS
INIADLPVLPKVLPYLKLLFRNDMTVDESNDVVVTVDESDDVVDVATSAS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaattttaaactttcgcaactttcttttcctcccttcttataaacccacaacc
cacttccgactccgattcctctcaacccttgtttcctcttcttctcgccgcagtaacatc
aacgctcctcctcttcatctccgccgcagaagcaccaccaccagcaccaccccaatggaa
gtcgaagagaatagctccgttggtttcaacaaaagaagggcagagggtactgaaaattcc
ggtttacccaagaaaaatcttcaactcaaagttcgaaaacttaatcccattaacactatt
tcgtatgttcaggttttgggtactggaatggatactcaagatacatcacctgctgttatg
cttttctttgataaacaaagattcatctttaatgctggggagggactgcaaagattttgc
actgagcatgggattaagttgtcaaagatagatcacatatttctttctcgtgtctgttct
gagactgctggtgggctcccaggtttactgcttactctggctggtatgggagacgagggg
atgacggtcaacgtatggggcccttcagatcttaagtatttagtagatgccatgagatct
tttattcccaatgccgccatggttcacacaaaaagttttggacccacctttggcactgag
tccactgtgaagagtcaaagtgaccccattgttcttgttgatgatgaggtggtcaaaata
tcagccattatcctccaaccttgtcagatcccttcacaaaagacagatcatagcatagac
atcgctgattccctcaacggaaaaaagctgctagctgctaagcctggtgatatgtctgta
gtatatgtttgcgaactgcctgagattcaaggaaaattcgatccggagaaagctaaggca
cttggtctaagacctggaccaaagtatcgtgaactgcaacttggaaattcagtggaatct
gatcgccagaagaatgttatggttcacccaagtgatgtcatggatccttctattcctggt
cctgttgtacttgttgtagattgcccgacagaatctcacttggaagcattattgtccgca
aaatcacttgacacttacggcgatcaagtgggaaacctgccaaaggctggtaaaagtgtt
tcatgcgtaattcacttaactcctgaatctgttgtttgctgttcaaattaccaaaattgg
atgaagacatttagttctgcacaacatataatggccggacatgaaaagaaaaatatagag
gttcctattttgaaagccagtgcaagaattgcaacacggcttaattacttgtgtcctcga
ttctttccagctccaggattttggtctcttccaaatcagaattgctcaaaacctgtctct
cttgcttcaagcgaggattctttttcagcaccttctaatgtcatttacgctgaaaatctt
ctcaagtttactttgcgcccctatgttaatcttgggttggatagatcatgtattccacct
aaagcgtcttcctcagaaattattgatgagttgctgttagagattccagaggttgtggaa
gcagctcagcatgtcaggcagctctgggaagattccagtcaggcgaaggaagattcaatt
cctttggctgatcacagtgaggtgattgaggagccatggctgtctgaagatggtattact
cctgcttgcttggaaaatataaggagagatgacttggagatagtgcttcttggaactggt
tcatcccagccatccaagtatcgaaacgtgacctcaatatatataaatcttttctcaaaa
gggggtttgctcttggattgtggtgaaggaaccttaggacagctcaaaagaagatatggt
gtaagtggtgccgatgacgttgtgagatctttaagctgcatttggatttcacatattcat
gccgatcaccacactgggttgacaaggattctcgctctacgacgtgatttgctgaagggg
gttcctcatgaaccggtgcttgttgtaggaccaaggatgctcaagagatatttagatgca
taccatagactagaagatttagacatgttatttcttgactgcaagcacacctttgaagcg
tcattggctgattttgagaatgacttgcaagaaacagttaattctctggatctgaacaat
aataatgcagaaataaatgcatcaaaagttgattcaactttatttgctagagggtctcct
atgcaaagcctttggaaaagaccaggtagtcctgttgacaaagacacagtttatcccctc
ctacggaaattgaagggggtaatccaggaagctggtctcaatactttgattagttttccc
gttgtacattgctcacagtcatatggtgttgttctagaagcagaaaagaggattaatagt
gttggaaaagtgatacctggttggaagattgtatattctggtgacacaaggccttgccca
gagctaataaaagcatctcgagatgcaacagttcttatacacgaggcaacttttgaggag
ggtatggtattggaggctatagcaagaaaccacagcaccaccaatgaagccatagaaacg
ggagaggctgctaatgtatatcgtatcatacttactcacttcagccaaagatatccaaaa
attcctgtaatcaacaaagaacacatggatataacgtgtattgcatttgacttgatgagt
atcaacatagcagatttgccagtgcttcccaaagttcttccatatctgaaattgcttttc
agaaatgacatgacagttgatgagtcaaatgatgtagtagtgacagttgatgagtcagat
gatgtagtagatgttgccacttccgcttcttga
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