Medicago truncatula (barrel medic): 11427341
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Entry
11427341 CDS
T01716
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mtr01001
]
11427341
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11427341
Enzymes [BR:
mtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
11427341
Protein kinases [BR:
mtr01001
]
Serine/threonine kinases: Other
Other
11427341
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
11427341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
11427341
NCBI-ProteinID:
XP_003603512
UniProt:
G7JCB0
LinkDB
All DBs
Position
3:complement(53578690..53588142)
Genome browser
AA seq
1929 aa
AA seq
DB search
MDNQPNQNQAQPPRDEEEDEDSSRMEDEELISKVNKLMDKITSSPDNPKPNVLHALATIL
ETQESNYMDENAHSSSTNARAAHNIGRLGSIIRENDDFFELISLKFLSENGYSTAVRAAS
VRLLLCCSLTWIYPHVFEEPVLENLNNWATEDSSRSAAEEQNLKRDPVGKDASDSEMLKA
YSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLCVLGETSGSQKDSSHLSENKHSSGN
TSVRGRDDSRGRFRQLLESSHVDDTRMIEEGSFDDQAPERGQDSGQACQEDPWIDGEPPD
GLSEGADVCEADSEGEERWRCKDIRDGRIKYGDHEDNARDESSRRRTNRGWGRSRGKGRV
NEGPVDSEPVLSSAGSASRLGQGRSVRDRSSLRNGDVKRVPDSKKTLTSSISEALISERE
DNDDCFQECRIGSKDISDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEY
KSTNDEEASVLAASRAASTVIDAASAVEVSRRSVCINTETENVTSRETESIEDVEDYFLP
DTRTLTQLREKYCIQCLALLGEYVEVLGPVLHEKGVDVCLGLLQQNSKHHEPSKVAFVLP
DVMKLICALAAHRKFAALFVDRGGMQKLLAVPRTAQTFFGLSSCLFTIGSLQGIMERVCA
LPSDVIYHVVELALQLIECNQDLARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLND
AASIRSGVTSGALGSSNSGSLRNDRTSSAEVLTSSEKQVAYHTCVALRQYFRAHLLVLID
SIRPNKSNRSSARNIPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTGWREVEKF
LASNGHITMLELCQAPPVERYLHDLLQYALGVLQIVTLVPSSRKMIVNATLSTNRAGISV
ILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKPPAVSQGQQFPSSQASNGALETR
DRNAERNITDPRERNGESSAVDRGTAAALTTQSVNTTPQTPVPSASSGLVGDRRISLGAG
ARCAGLATQLEQGYHQAREAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLA
RDDTIAHILTKLQVGKRLSELIRDSGSTTLGTEQGRWQAELSQAAIELIGIVANLGRAST
LVASDAATPALRRIERAAIAAATPITYPSRELLLLIHEHLQASGLGQTASLLLKEAQLTS
LPSLLAPSSLAQQPTTQEVSSTQIQWPSGRTPSGFLTSKLKYNSKNEDACLKSDAGSARK
KSLTFSSSFGSHTRHQVIDSRHSSTRKWLRAGKESSETSTVENPSESSVKHNTETGSQFK
TPITLPTKRKLSDLKDIPMFSSSAKRLNVGDQGLRSPICSSSVRKSSLHTDAVGLFTPTG
NLRSQQGRCTADYVDDNQYCISNLGQMTPSSQVVNDLQLNNPERVTLDSLVVQYLKHQHR
QCPAPITTLPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFMYGGVHGNRKDRQFVF
SRFRPWRTYRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFTGHDAPLT
LVQSFVSGETQLLLSSSSKDVKMWDATSILAGPTRSFEGCKAARFSNSGKTFAALSSEST
AREILLYDIQEGKLEATLSDTFTTSTGRGHAYSSIHFSPADSMLLWNGVLWDPRVSTPVH
RFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTAITFNARGDVMYAILR
RNLEDVMSAMHARRVKHPLFSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITM
DDQGDMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDDDDDNEDPLLGPGFGVGSDSDA
EDMSSNEDDDDSVSDPDDDDDDGGYMMDDIDFDGHDMLDIVTDGDEDDDDDSQGLESESS
DDDYDFGGY
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggataatcaaccgaatcaaaatcaagctcaaccaccacgtgacgaagaagaagacgaa
gattcatcgaggatggaagatgaagagttaatttcaaaggttaacaaactcatggataaa
atcacttcctctcccgataaccctaaacctaatgttcttcacgctcttgccaccattctt
gaaactcaagagtccaactacatggatgagaatgctcattcatcttcaaccaatgctcgt
gctgcccataacattggacgccttgggagtataattcgggaaaacgatgatttctttgag
ttaatatctttgaagtttctctccgaaaatggatactccaccgcagttcgagctgcttct
gtcagactactcttgtgctgttctctaacttggatttatccccatgtttttgaagaaccg
gtccttgagaacttaaacaattgggcgacggaggatagtagtaggtcggcggcggaggag
caaaacctgaagcgtgatccggtgggaaaagatgcctcggattcagaaatgttgaaagca
tattctactggactccttgccgtgtgtttggttggtggaggtcaaatagtggaagatgta
ttgacatctggcttgtcagctaagctcatgcgatatcttcgtttgtgcgtgctgggtgag
actagtggcagccagaaagatagtagtcatttatcggagaacaaacattcatctgggaat
acttcagtgagaggtagagatgatagtcgtggaaggtttcgccagctcctggaatcaagt
catgtagatgatacaaggatgattgaagagggatcttttgatgaccaagctcctgaacgg
ggtcaggatagcggacaagcttgccaagaagatccttggatagatggtgaaccacctgat
ggactcagcgagggtgctgatgtctgcgaggctgattccgagggggaagagagatggcgc
tgtaaagatattcgtgatggaaggataaaatatggtgaccatgaagacaatgctagagac
gaatcttctaggcggcgtactaaccgtggatggggaagatctagggggaaaggaagggtc
aatgaagggccagtagacagtgaacctgttctgtcatctgctggttccgccagtcgccta
ggacaggggcggagtgttagagataggagctcgttgaggaatggtgacgttaagcgggtg
cctgattctaagaagactcttacgagttctatttccgaggctttgatttctgaaagagag
gataatgatgattgtttccaagagtgtcgtattggaagtaaagatatctccgatcttgtt
cggaaagcagtccaagctgctgaagctgaagccaggtcagccaatgcacctgaagaagcc
gtcaaagcagctggtgatgctgctgctgaccttgttaaaactgcagcttcagaggaatat
aaatccaccaatgatgaagaagcatctgttttggctgcttcgagagctgcatcaactgtt
attgatgctgcatctgctgttgaagtttcaaggagatctgtctgcatcaataccgagaca
gagaatgttactagcagagaaacagaatccattgaggatgttgaagattatttcctccca
gacactcgaacacttacacaattgagggaaaaatattgcattcagtgtcttgcattactt
ggagaatacgttgaagttcttggacctgtattgcacgagaagggtgttgatgtttgtctt
ggacttctgcagcaaaattctaaacatcacgagccgtccaaggttgctttcgtgttgccc
gatgtcatgaagctgatatgcgctttggctgcccataggaaatttgctgcactatttgtg
gaccgtgggggaatgcaaaagcttcttgctgtccctagaacggcccaaacattctttggc
ctttcttcgtgtttatttaccatcggttcccttcaggggataatggaacgggtttgtgct
cttccatctgatgtgatttatcatgtggttgagttggctctccaactcatcgagtgcaat
caagacctagcccggaagaatgcagcattgttttttgctgccgcatttgtctttagagca
gttctcgatgcttttgactctcaggatggtttacagaaattactgggccttctcaatgat
gctgcttccataagatcaggagtaacttctggagccttgggctcgtctaactcaggatca
cttcgaaatgatagaacatcatctgctgaagtgctgacctcatctgagaagcaggtagcc
tatcacacttgtgttgctctgcggcaatatttcagagcacacctcctagtattaatagat
tctatccgtccaaacaaaagcaatcgtagttctgctagaaatattccaagcacaagggct
gcttacaagccactagatattagtaacgaggcaatggatgcagtattcttacaattacaa
aaagatcggaagctaggtccggcatttgtcagaacaggttggcgagaagtggagaaattc
ttggcatctaatgggcatattactatgctggaattatgtcaggccccacccgtggagcga
tatctacatgatttgcttcagtatgcattaggggttttgcaaattgttacattggtacct
agcagtcgtaaaatgattgtaaatgcaacattaagcaccaatcgtgctggtatatctgta
attttggatgcagcaaatattgccagtagtcacgttgaccccgagataattcaaccagca
ttaaatgttttagtcaaccttgtttgccctcctccttcaatcagcaataaaccacctgca
gtgtcacaaggccagcagttcccgtcttcacaagcctctaatggtgctctagagactaga
gacagaaatgccgaacgtaatatcacagatcctagggagaggaatggagagtccagtgct
gtagatcgaggaactgctgcagcactgactacacaatctgtgaatactactcctcaaact
cccgttccctctgcaagttcaggcttggttggtgaccgaagaatatctttgggtgcagga
gcacgctgtgccggccttgctacacagttggaacaaggatatcatcaggcaagagaggct
gtccgtaataataatggtataaaggttcttctgcatctcctccaaccgcgtatatattca
cctccagctgccctggactgtctccgtgctctagcttgtcgggtactgcttggattagcc
agagatgatactattgcacatatattgacaaaacttcaggttgggaaaagactgtcagaa
ctaatccgggattcaggcagcacaacacttggaacagaacagggtaggtggcaagctgaa
ctatcccaggctgcaattgagctaattgggattgtcgctaatttagggcgtgcaagtaca
ttagttgctagtgatgcagctactcctgcattaaggcgcattgaaagggctgccatagct
gctgccactcctattacttacccttcaagggaactcttgctcttaattcatgaacacttg
caggcatctggattgggacaaactgcttctttattgcttaaagaggctcagttaacttct
ttgccgtcattacttgctccatcttcccttgcacaacaacccacaacacaggaagtttct
tcaacacaaattcagtggccttcgggtcgtactcctagtggatttctcaccagtaaactg
aagtataattcaaagaatgaggatgcttgcttgaaaagtgatgctggctctgcaaggaaa
aagtcgctaactttctcgtcgtcttttggttctcatacaagacaccaagttatcgactct
cggcattcatcaaccagaaaatggttacgtgctgggaaagagtcttcagaaactagtaca
gtagagaatccatctgaatcttcagtaaaacataacactgaaactggatctcagttcaag
actccaatcaccttgccgaccaaacgaaagttatcggatctaaaggacataccaatgttt
tcatcatctgcaaagcgactaaatgtcggggatcagggacttcgttctcctatttgctcg
agttcagttcgtaaaagcagcctgcatactgatgctgttgggcttttcacaccaactggt
aatctgaggagtcagcaaggccgttgtacagctgactatgtggatgacaatcagtactgc
atctcaaatctaggtcagatgacaccatcctcccaagtagtgaatgaccttcagctgaac
aaccctgagcgtgtgacactggattctctagtggttcagtatctgaaacatcagcatcgc
caatgcccagcccccattaccacccttcctccaatatctcttctgcacccacatgtttgt
ccggaacctaagcgaagcctcgatgccccctctaatgtgactgctcggcttggtacccgt
gaatttaagtttatgtatggtggagtacatggtaatcgcaaggatcgtcaatttgttttt
agccggtttaggccatggcgcacttatcgggacgatgcgggtgcattattaacatgcatt
acttttgttggagactcctcgcatattgctgttggtagccatactggagaactcaaattt
tttgattcaaacaacaataatgtggtagagagcttcactggccacgatgctcccttgacc
cttgttcaatcttttgtttctggtgagacccaattgttgctttcttcgtcctctaaagat
gttaagatgtgggatgcaacatcaatattagctggtcccacccgatcatttgaagggtgc
aaggctgccaggtttagtaattccgggaaaacatttgctgccttgtcttcagaatctact
gcacgggaaatccttttatatgatatccaggaaggcaagttagaagcaaccttgtcagat
acattcactacttctacagggcggggtcatgcttattcttcaatccactttagccctgcc
gattcaatgctgctttggaatggtgtcttatgggacccgcgagtgtctacgcctgttcat
cgctttgatcagttcactgattatggaggtggaggctttcatcctgctggaaatgaggtt
attataaactccgaagtctgggatctgcgcaagttcagacttctacgtagtgtagcatca
ttagatcagacggcaataacattcaatgctcgtggagatgttatgtatgcaatcttaagg
agaaatcttgaggatgtaatgtcagcaatgcatgcacgccgtgttaagcatccgcttttt
tcagcgtttcgcacagtggatgcaataaattattctgacattgctaccatccctgtggat
cgctgtgttcttgattttgcaaccgaaccaacagattcatttgttgggttgattaccatg
gatgatcaaggtgatatgtattcgtcagccagatcatatgaaattggtcgtcggaggcca
actgatgatgattctgatcctgatgatgctgaaagcgaggaagaagatgaagatgacgac
gatgacaatgaagatcctcttttaggccctggttttggtgtgggaagcgacagtgatgct
gaagacatgagcagcaatgaagatgatgatgatagtgtaagtgatcctgatgatgatgac
gacgatggaggttacatgatggacgatatagactttgatggacacgacatgttggatatt
gtgacggatggggatgaggacgacgatgatgatagtcaaggacttgaatccgagagtagt
gatgacgattatgactttggtggttattag
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integrated database retrieval system
