Medicago truncatula (barrel medic): 11427383
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Entry
11427383 CDS
T01716
Name
(RefSeq) RING-H2 finger protein ATL11
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11427383
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11427383
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
11427383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Prok-RING_1
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Zn_ribbon_IFT122_C
DUF7340
zinc_ribbon_16
zf-RING_4
RINGv
Prok-RING_4
zf-Nse
DUF1272
Motif
Other DBs
NCBI-GeneID:
11427383
NCBI-ProteinID:
XP_003615196
UniProt:
G7KAK0
LinkDB
All DBs
Position
5:28663762..28665196
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AA seq
385 aa
AA seq
DB search
MRIHTIFPAPAPSLTLLQLCKKFHRHAWQPFPFLLLFLSFIFPATAQPSPPQDAFAKMKF
DKTMASVLVILVMVFFTLGFISIYTRQCRERRIRGRVDLTAPVTGGDVCRQSRGLDPTII
ENFPKFVYSEVKDLKIGRVTLECAVCLNEFADDETLRLIPNCSHVFHRDCVDVWLLHHST
CPVCRAELVPGSDDAGSSVQIQISEPNLAEPVFNHEPDVIEPVGLDEKKKVLIVSPSVNF
DGMNRTPVRSMSVGFGFMRLFSRSKSTGQLMVRSDEDCERFTLRLPDEVHNRLMNDITLR
RTKTWEATLGSGKRGYRTRSVGRNFLQYERFNVESRLDQKGFTCAPSFLGRVGSMRSTKD
GNNASATMGVMSKVDAGERSSDRLV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcacaccatattccctgcacccgcaccatctctcactctcttacaactctgt
aaaaaatttcaccgccatgcatggcaaccgtttccttttcttcttctttttctttctttc
atctttccggcaactgctcagccatcaccaccgcaagatgcattcgcgaaaatgaagttc
gacaaaactatggcatcagtccttgtgatactcgtcatggttttcttcacattaggtttt
atttcaatctacactcgccaatgtagagaacgaagaatacgaggaagggtcgatctaact
gctccggttaccggtggtgatgtttgccggcaatcacgcggtcttgatccaacgatcatt
gaaaattttccgaaatttgtatattctgaggtgaaggatctcaagattggaagagtcacg
ttagaatgtgcagtgtgtttaaatgagtttgcggatgatgaaacgctgcgtttgattcct
aattgtagccatgtatttcatcgtgattgtgttgatgtttggttgttgcatcactctact
tgtccggtttgtcgagctgaacttgttcccggttcggatgatgcaggttcttctgttcag
atacagatctctgaaccaaatttggctgaacccgtttttaatcatgagcccgatgttatt
gaaccggttggtttggatgagaagaaaaaagttttaatagtgagtccaagtgtgaatttt
gatggtatgaaccggactcccgttcggtccatgtcagtggggtttgggtttatgagattg
ttttctcggtctaaatcaacgggtcaattaatggttcggtcggatgaggattgtgagcgg
ttcacgttgagattgccggatgaagtgcataatcgattaatgaatgatatcacgttgcgc
cgaacaaagacctgggaagctacattaggtagtgggaaaaggggttaccgaacaaggagt
gtggggaggaactttctacaatatgagcggttcaatgtggagagccggctggaccaaaaa
gggttcacgtgtgccccatcttttttgggccgggttggttcgatgagatcaacaaaggat
gggaacaatgcaagtgcaacaatgggtgttatgagcaaagttgatgctggagaacgttct
tcggatcgtttagtttaa
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