Medicago truncatula (barrel medic): 11427400
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Entry
11427400 CDS
T01716
Name
(RefSeq) F-box/LRR-repeat protein 2
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11427400
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
11427400
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
LRR_8
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
11427400
NCBI-ProteinID:
XP_024638925
LinkDB
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Position
5:43092357..43097436
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AA seq
609 aa
AA seq
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MKRKRASLRQLAASLKTTMESTQSKTKITMESSNAKKRRKSISSGSYLPDECWECVFKFL
KDDNHYLKSLSLVSKQFLSITNTLRFSLTICDQTLPFLPTLFHRFTNLTSLNLSRFYGNL
NKLLCQISHFPLKLTSLKLSDQSVIPAFGFRAFSKKITTLTSLTCYEMHYINSSDLLLIS
DCFPLLEVLDLRYPTQCNYDELEELALFKLRKVNLSGHYHVDKLIFQLFKNCKFLEEAIL
LTCFDTTFDGLASALRQRPTLRSLSFSNTFGPVDQTYESTYITSHFRSTLASFKYLTSLD
LLSSNISDVFLISIAIQGLPLTRLVLQNCTGYSYSGIICLLSKCQHLKHLDLENAVFLKD
EHVVEMSSFLGDLVSINLASCPMVTVSAFFVLLRNCPSLGDINMEDTGIGKESLESSRSL
MNFVAYPQLKYLRLAHNPWLFDEDITMFASIFPNLQLLDLSNCCRIFEEGIVQVLRMCCN
IRHLNLSKCSIVRLEIDFEVPKLEVLNLSYTKVDDEALYMISKSCCGLLKLSLQDCNDVT
KKGVKHVVENCTQLRKISLNGCFKVHANVVSLMVFSRPSLRRIRAPPAPMGAFSGRKVNY
FLRHGCLVR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaagagagcctctctcagacaattagctgcttctctaaaaacaactatggag
tccactcagtcaaaaacaaaaataacaatggaatccagtaacgcgaaaaaaagaagaaaa
tcgataagttctggttcatatttaccagatgagtgttgggaatgtgtcttcaaattcctc
aaagacgataatcactacttgaaatctctctcactcgtctccaaacagtttctctccatc
accaacactcttcgattctctcttacaatctgtgatcaaactctcccttttcttcctact
ctctttcatagatttaccaatctcacctccctcaatctctcgcgcttctatggtaacctc
aacaaacttctttgtcaaatctctcattttccattgaaactcacatcactcaaactctca
gaccaaagcgtcatccccgcatttgggtttcgagctttttccaaaaagattacaactttg
acctctctcacttgttacgaaatgcattatatcaatagcagcgatcttttacttatctct
gactgtttccctttgttggaagttctcgatctcagataccccacacaatgcaattatgat
gagctagaggagcttgcactttttaaactccgtaaggttaatctctctggtcattatcat
gttgacaaattaattttccagttgttcaaaaattgtaagtttcttgaagaggccatcttg
ttgacatgttttgatacaacctttgatggtcttgcttctgctctccgccagagaccaaca
ttgaggtctttatcattttccaatacttttggacctgtagaccagacatatgaatcaact
tacattacttcacatttcagatccaccttggcgagtttcaagtatttaacttctcttgat
ttattgtcttccaatatctcagatgtgtttctcatctctattgcaatccaaggtctacct
ttgactaggcttgttctccaaaattgcaccggttatagttattctggaattatttgttta
ctgtccaagtgtcaacatttaaaacatttggatcttgaaaatgctgtttttctcaaagat
gaacatgttgtggagatgtcttcgtttcttggtgatttggtatctataaacttggctagt
tgcccgatggtcacggtatcagccttctttgtacttcttaggaattgtccttcacttggt
gatatcaatatggaagacacaggtattgggaaagagagtctagagagttctagatctttg
atgaattttgttgcataccctcaattaaagtatcttcgattggctcacaatccgtggtta
tttgatgaagacatcacaatgttcgcttccattttccccaatttgcagctgcttgatttg
agcaattgttgtcgcatatttgaagaaggtattgttcaagttttaaggatgtgttgtaac
attagacatttgaacttatccaagtgttccatagtgagactagaaatagactttgaagtt
cccaaactggaggtgttgaacttgtcatatacaaaagttgatgatgaagcactttatatg
atctcaaagagttgttgtggacttttgaaattgtcacttcaagattgtaatgatgtcaca
aagaagggagtgaagcatgtggtagaaaactgtacgcaattgagaaagattagtttgaat
ggttgttttaaagtacatgctaatgttgtttctttgatggtattttcaagaccgtcgttg
agacggataagagctcctccagctcctatgggtgcctttagtggaagaaaggtgaattac
ttcttgcgtcatggatgccttgttcgctag
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