Medicago truncatula (barrel medic): 11427408
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Entry
11427408 CDS
T01716
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11427408
Enzymes [BR:
mtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
11427408
Ribosome biogenesis [BR:
mtr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
11427408
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
11427408
NCBI-ProteinID:
XP_003603819
UniProt:
G7J5V2
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All DBs
Position
3:56902923..56908102
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AA seq
456 aa
AA seq
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MLSLNTSCGFCGVSTSTKAFQFHFRTSSSPFFFSPLNNFKLRSSIAKSFSTFSNDSNSST
EEPKSNYAGVLLEEIVHDGGIKSGKLRLDSWISSRINGISRARVQSSIKAGLVHVNGRVV
DKVSFNVRAGDEIKCTIAELQQLRAVPENIPLDIVYEDDHLLVINKPAHMVVHPAPGNTS
GTLVNGILHHCNLPNVEFSKEEALSDTEDSDDELNGFSSQSSSSVGLDSRLSMASIRPGI
VHRLDKGTSGLLVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVSGRVEVPVGRDP
NNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGV
PLLGDEVYGGTKSMVLSLLRPRTTPSLHSEMFKTVSGLDRPCLHASTLGFQHPHTGEQVH
FSCEPPVDFNDILSQLRRIGSESISHSKAKFLKGVL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgcttaatacctcatgtggattttgcggcgtttccacatcaacaaaagcattc
caatttcactttcgaacttcatcttcaccatttttcttctctccccttaacaactttaaa
ctccgctcctccattgcgaaatccttttctactttctccaatgattcgaactcctccacc
gaagaaccaaagtcgaattacgccggcgtgctgttggaagaaatcgtccacgacggtgga
atcaaatctggaaaattgagactcgatagttggatttcttctcgcattaatggcatcagt
agagctcgcgtccagtcaagtattaaagctggactcgttcatgtcaatggccgtgttgtt
gataaggtttctttcaatgtcagagctggggatgagatcaagtgcacaattgcggagttg
cagcagttgagagctgtgccggaaaacatacctctggatatagtttatgaagatgaccat
ttgctagtcataaataaacctgctcacatggttgtgcatccagcacctggcaatacgtct
gggacacttgtaaatggcattctgcaccattgcaacctgccaaatgttgaattttctaaa
gaggaagctctttcagatacagaagattctgatgatgaactcaatggtttctcatcccag
tcaagttcttctgtagggttagattctagattgtctatggcatcaattcgcccagggatt
gtacacagattagacaaaggcacgagtgggttgctagttgttgctaagaatgaacattct
catatgaaattgtctgaacaattcaagctacgcactatcaagagggtatatgttagtctc
acagctggggtacctactccagtttctgggcgtgttgaggttcctgttggccgtgatcct
aataaccggcttcgtatgatcgctgttgctggactagttaattctgtgaaggcccgtcat
gcagctagtaggtacaaagtaattgagatacttgctgggggtagctgtgcattggttgag
tggaagttggaaactggacgcactcatcagatccgtgcacatgccaagtatttgggtgta
cctctgctaggtgatgaggtatatggagggacgaaaagcatggtcttgtcattgctacgg
ccacgaacaactccaagtttgcatagcgaaatgtttaaaacagtttctgggctagatagg
ccttgccttcatgcctcgactctcgggtttcagcatcctcatacaggggagcaggtgcac
ttttcatgtgagccccctgtagattttaatgacattttgagccagcttcgcagaattggt
agtgaaagtatttctcactcaaaggccaaatttttaaaaggggtattgtaa
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