Medicago truncatula (barrel medic): 11427620
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Entry
11427620 CDS
T01716
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11427620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11427620
03012 Translation factors [BR:
mtr03012
]
11427620
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
11427620
Translation factors [BR:
mtr03012
]
Eukaryotic type
Release factors
11427620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
11427620
NCBI-ProteinID:
XP_003624559
UniProt:
G7KYC6
LinkDB
All DBs
Position
7:complement(39526438..39530029)
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AA seq
435 aa
AA seq
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MADGESDKNIEIWKIKKLIKGLEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNI
KSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTEDGKEKKVTFDFEPFKPINA
SLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGR
GGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQSD
MFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETGK
YVYGVDDTLKALEMGAVETLIVWENLDITRYVLKNATTGEIVIKHLKKGQENDQSNFRDV
ATSADLEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIR
SFDELSDDEVYEDSD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtgaatcggacaagaatattgagatatggaagatcaaaaagttgatcaaa
ggactggaagctgcaagaggtaatggtactagcatgatttctctgataatgcctccacgc
gatcaaatatctcgtgtcactaagatgttgggagatgaatttggaactgcttcaaacatc
aaaagtagggtaaaccggcaatcagtgcttggagccattacttctgcacaacagaggttg
aaactttataataaggttcctccaaatggattggttctgtatactggtaccattctcact
gaggacggcaaggaaaagaaggtgacgtttgattttgaacctttcaaaccaatcaatgca
tcactttatctctgcgacaacaaatttcacacagaagctctaaatgaacttctagaatct
gatgacaagtttggttttattgttatggatggaaatggaacccttttcgggacattaagt
ggaaatactcgtgaggtgcttcataaatttactgttgatctaccaaagaaacatggtaga
ggaggacagtcagctttgcgttttgctcgtcttcggatggaaaaacgacacaattacgtc
aggaagactgcagaacttgccactcagttttacatcaaccctgctaccagtcagcctaat
gttgctggactcattcttgctggttcagctgacttcaagactgagctgagtcaatcagat
atgtttgatcctcgtttgcaagcaaaaatattaaatgtggttgatgtctcttatggtggg
gaaaatggctttaatcaagctattgaattatctgcagagattctatctaatgtgaagttc
attcaagagaaacgcttgataggaaaatattttgaagagataagccaagaaactggtaaa
tatgtttacggagttgatgacacattgaaggctctagaaatgggtgcggttgaaacactc
attgtatgggagaatttggatattactaggtatgtgctgaaaaatgctaccactggtgag
attgtaataaagcatttgaagaagggacaagaaaatgatcaaagcaacttccgcgatgtg
gccacatctgcagatttggaggttcaggagaagatgccgttacttgagtggtttgcgaat
gagtacaaaagatttggatgctcgctggaattcgtgaccaacaaatctcaagaagggtca
cagttttgcagagggtttggtggtattggaggtatgcttcgctaccagcttgatatcaga
tcatttgatgagttatctgatgatgaagtgtacgaggattctgattaa
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