Medicago truncatula (barrel medic): 11428002
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Entry
11428002 CDS
T01716
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11428002
03036 Chromosome and associated proteins [BR:
mtr03036
]
11428002
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
11428002
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
11428002
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
11428002
microRNA pathway
RISC loading complex
11428002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
11428002
NCBI-ProteinID:
XP_003598353
UniProt:
G7IVG6
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All DBs
Position
3:2533036..2539248
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AA seq
867 aa
AA seq
DB search
MRKTLNSNHVPMARRGLGSKGAKIQLLANHFRVGLSKNDGYFYHYNVALCYQDGHAVEVK
GVGRKVIDKLCETYDVLRNKNFAYDGEKSLFTLRSLHHKKQEFIVVLEEVSSTRVGSNPS
EATKRMKHQSRSKTFKVEISHVSKIPLQEITDALRGQESEHYQEAFNFLDTILRQNAAKQ
GCLRIHKSYFHDNQKNITNLEGGIQCCRGFHSSFRVTQRGLSLNVDVSTTLLVKPGPVVD
FLLQNQNVQKPNLIDWTKAKRMLKNLRIKANNTQRKITGLSEKSCMTQNFLFKHGNDANG
EVQSSEITIYEYFKRHKKIELCYSVDMPCINVGKPKRPIYYPMELCTLVSLQRYTKPLAH
KQRAQLILESRTSPRERKEALQYSLRNSRYGDEPMLRSLGITIEPSFTQVDGRVLQPPTL
IVGRGQNFCPRNGSWNFNDKKLIEPVKIKRWAIVNFSSQCDTKHLCSMIKKCSEMKGMLI
DPPFDIFEEDIRHRNESPFARVARMYEMVKAKLPGPPTHPLAQLLLCILPVSRNCNIYGP
WKRRCLVDEGIATQCIAPTKINDHYIINVLLKINAKLGGMNSFLLTEFKHSIPLFSKIPT
LVIGMDVSHGSQGQSEALSIAAVVSSRCWPQISRYKAVVRTQSSKVEIVQSLFKPVSDTK
DDGIISELLKDFQTTSGVKPQQIIIFRDGVSESQFNQVLNIELNEIIKACKCYDESWCPK
FTLIVAQKNHHTRFFKANSPQENVSPGTVIDNTICHPKDNDFYMCAHAGRIGTSRPTHYH
VLYDEIGFSADNLQEFVHSLCYVHQRSTNAISIVAPIYYADLAAAQIAQFIKYDESENLS
SHNEFISQIPTELPRLHERVADSMFFC
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagacattgaattcaaaccatgtgcccatggccaggagaggtcttggatccaag
ggagccaagatacaactcttagcgaaccattttcgagttggcctgagcaagaatgacggc
tacttctatcactacaatgttgctttatgttatcaagatggacatgcggttgaagtgaaa
ggagttgggagaaaagtcattgacaagctttgtgaaacatatgatgtattaagaaacaag
aattttgcatatgatggcgagaaaagtttattcactcttcgttctctacatcataaaaag
caggaattcattgttgtgttagaggaagtttcatcaacgagagttggaagcaacccttct
gaagcaaccaagagaatgaagcatcaatctcggtccaaaacatttaaggttgagattagt
catgtatctaaaattccgttacaagaaattacagatgccttgagaggtcaggaatctgaa
cactatcaggaagcatttaatttccttgacacaatactgaggcagaatgcagcaaaacag
ggatgtctccgtattcataaatcgtactttcacgataatcaaaagaatattacaaacctg
gaaggtggtattcaatgttgtcgtggcttccattcgagcttcagagtcacacaaagaggt
ttatctctcaatgttgatgtgtcaactacattacttgtaaagcctggtcctgtagtggac
ttccttctccagaatcagaatgttcagaaaccaaacttgattgattggaccaaggcaaaa
agaatgttgaaaaatcttagaatcaaggctaacaatacacaacgcaaaatcactggacta
agtgaaaagtcctgcatgacacaaaattttttatttaaacatggaaatgatgctaatggt
gaagtgcagtcaagtgaaataacaatttatgaatacttcaaacgccacaaaaagattgaa
ctttgttattctgttgatatgccatgcatcaatgttggaaaaccaaagaggccaatttat
taccctatggagttatgcacattagtctcattgcagcgatacactaagccgttagcgcat
aaacaaagggctcaactgatattggaatcaaggactagtcctcgtgaaaggaaagaagct
ttgcaatattctttaagaaacagcagatatggcgatgagcctatgcttcgctctttaggg
attactatcgaaccttcctttacacaagttgacggtcgtgtcttgcaacctccgacactt
attgttggaaggggacagaacttttgtccccgaaatgggagctggaatttcaatgataag
aaactaattgaacctgtgaagattaagcgttgggcaattgtaaacttttcgtcacagtgt
gatacgaaacatttgtgcagtatgattaaaaaatgttctgaaatgaaagggatgctcata
gatcctccgttcgacatatttgaagaggatattcgccataggaatgagtcgccatttgcg
agggttgcaagaatgtatgaaatggtaaaggccaagctacctggaccccctacgcatcct
ctagctcagcttcttttgtgtattcttccggttagcaggaattgtaacatttatggtcct
tggaaaagaagatgtcttgttgatgaagggattgcaacacaatgcattgctccaacaaaa
attaatgatcattacattattaatgttctattgaaaattaatgcaaagcttggtgggatg
aattcctttttgttaactgaatttaagcattcgataccactgttttcaaaaatacctaca
ttggttattggaatggatgtttcacatggatctcaaggtcaatcagaagcactatccatt
gctgcggttgtgagctcaagatgttggcctcaaatctctcgttacaaagctgtagtccgc
actcagtcgtcaaaagtagagatcgttcagtctctattcaagcctgtttctgatactaag
gatgacggtatcatcagtgagttgcttaaagacttccaaacaacttcaggagtaaagcct
caacaaattataattttcagggacggcgtgagcgaatcacagttcaaccaagtcctcaac
attgaattgaatgaaatcataaaggcatgtaagtgttatgatgaaagttggtgtccaaag
tttactttgattgttgctcagaagaatcatcacactaggttcttcaaagccaattctcct
caagaaaatgtttcacctggaactgttattgataacactatatgtcatcccaaagacaat
gacttctacatgtgtgcacatgctgggaggattggcacaagtcgtcctactcattaccat
gttttatatgatgaaattgggttctcagcagataatttacaagaatttgtgcattctcta
tgttatgtgcaccagagaagcacaaatgccatatcaatagttgcaccaatatattatgct
gacctagctgctgctcagatagcacaatttataaaatatgatgagtcagagaatctttcc
agccacaatgaattcatatctcaaatacctactgagttaccacgtcttcatgaacgagtt
gcagattctatgttcttctgttaa
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