Medicago truncatula (barrel medic): 11428191
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Entry
11428191 CDS
T01716
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11428191
Transcription machinery [BR:
mtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
11428191
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
11428191
NCBI-ProteinID:
XP_003602198
UniProt:
G7J6R7
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All DBs
Position
3:44728699..44733927
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AA seq
514 aa
AA seq
DB search
MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA
KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE
RKIKRVSRRGKKIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKK
RNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVKD
DLQKELEREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDFA
NSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGLE
SVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQEE
FINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIAS
NLNISREMVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagttcagctgctcggactccactaggattgaatgcaaag
ttttcaactcaccatccggtattgaagagaccgttaacggtagcatttaaaggagataaa
caaaatgacacagcgttggttgcgactcaagagaaaattcctacgcaagttaaaccagcc
aagacgcacaagaaaaggatagcaaaaacgaataaactacctaagaaaccaagagccgtc
tgcactgaggaaacttttccatcttcattggatgtggattataatgaagctgctgccata
cttgaaaatatatacaaacttagcccgacaaccgatatatgtgatgcagattatatagaa
cgtaagatcaaaagagtctctcgaaggggtaagaagattggtgatgtaagtaaagaggat
tcaaacagtgatagggtggtcagaaaccagaaaacgaaagccaaacggatgaatcttgat
gagaggattgcgttaaaaacgagcgaaaatagtgaagatgtcattcctactcggaaaaaa
agaaatcccaggagtagagttgagaagattgacgaacttctaagggaatactcagtacca
gctgatttggtcagtctggactggaaaaaaatgaaaatacctccagttcttccttcttcg
gagcatgcatttttgttcaagttgatgcaaccaatgaaggcacttcttcaagtgaaagat
gatttacaaaaggagctagaaagagagcccacagaggatgaaatagccgacgcaacaaac
atgcacactactcaagtaaagaaagcaatagaggttggtcgagctgcaagaaataagcta
ataaagcacaatctccggcttgtcttgttcgtgatcaacagatatttttcagatttcgcc
aatagcccaaggtttcaggatctttgtcaggctggagttaaaggacttataacatcaatt
gatcgttttgagccaaaccggagatttcggctttcaacctacagtctgttttggataaga
catgctatcatccgttccatgaccctcgcaagcttctcacgtgttccctttggacttgaa
tcggttagagcagagatccgaagagctaagattgagttatcatttcagcttcagaggtca
ccaacggaggaagaaataatagaaaaagttcatgtatcccctgaaagataccgtgatgta
atgaaggcatcaaaaccccttctttcactgcattcaagacatctaaccacgcaagaagag
tttatcaatggggtcgttgatgatggtggtgttgatggcgataacaggaggcaacctgct
ctactaaggcttgctcttgatgatgtgcttgattccctgaagcctaaggaaaacttggta
atcagacagaggtttggacttgatggtaagggtgacagaactttgggagaaattgcctca
aacttgaacatctctagggaaatggtgagaaagcacgaagtcaaggctcttatgaagctc
aagcattcagctcgactggattatcttcgtcgctatgttgtataa
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