KEGG   Medicago truncatula (barrel medic): 11428530
Entry
11428530          CDS       T01716                                 
Name
(RefSeq) protein RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    11428530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11428530
   03036 Chromosome and associated proteins [BR:mtr03036]
    11428530
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     11428530
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    11428530
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Vitelline_membr
Other DBs
NCBI-GeneID: 11428530
NCBI-ProteinID: XP_003593160
UniProt: G7INS2
LinkDB
Position
2:complement(1467422..1475953)
AA seq 351 aa
MSNFLSNNTNPNPNPNKSIEVNQPPTDSVSSLNFSPKSNLLVATSWDNQVRCWEVARDGA
NNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIK
DIAWIPEMNLLATGSWDKNIKYWDTRQPNPVHTQQLPERCYAMTVKHPLMVVGTADRNII
VYNLQNPQVEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQAKNFTFK
CHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPVPCSAFNN
DGSIFAYSVCYDWSKGAENHNPATAKPYIFLHLPQESEVKGKPRIGATGRR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgaatttcttatcgaacaacacaaatccaaaccctaaccctaacaaatccatcgag
gtgaatcaacctccaactgattctgtttccagtctcaatttcagtcccaaatccaactta
cttgttgctacttcttgggataatcaggttcggtgttgggaggttgctcgtgatggagca
aataacgttgccactatgcctaaggcttctatagcgcatgatcatccggttttgtgctct
gcttggaaggatgatggcacaactgtcttctctggtggatgtgacaagcaagttaaaatg
tggcctctgttgtctggaggacaaccaattactgtagccatgcacgatgcacctatcaaa
gatattgcttggattcccgagatgaaccttttagccacaggaagctgggacaagaatata
aagtattgggatacaaggcagccaaatccagtgcacacacaacaactcccagagcgctgc
tatgcaatgacagtgaaacatcctctgatggtagttggcactgctgatagaaatattatt
gtttacaatttgcaaaatcctcaggttgagtttaagagaattgtttcacccttaaagtat
cagacaaggtgccttgctgcgttccctgatcaacaaggtttcttggttggatcaatagaa
ggaagagttggagtgcatcatttggatgatagtcagcaggctaaaaacttcactttcaaa
tgccacagagaggggaatgaaatatactcagtcaactctttaaacttccatcctgtacac
cacacatttgctacggctggttctgatggtgcttttaatttttgggacaaggatagtaaa
cagaggcttaaggccatgttaagatgcagccaacccgttccttgcagtgcctttaacaat
gatggttcaatatttgcttactcagtctgctatgactggagtaaaggggcagaaaatcat
aatccggcaacagcaaagccgtacattttcctgcacttgccacaggaatctgaggtcaag
ggaaaaccgcgcattggtgcgactggcagaaggtaa

DBGET integrated database retrieval system