Medicago truncatula (barrel medic): 11428530
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Entry
11428530 CDS
T01716
Name
(RefSeq) protein RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11428530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11428530
03036 Chromosome and associated proteins [BR:
mtr03036
]
11428530
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11428530
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
11428530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
11428530
NCBI-ProteinID:
XP_003593160
UniProt:
G7INS2
LinkDB
All DBs
Position
2:complement(1467422..1475953)
Genome browser
AA seq
351 aa
AA seq
DB search
MSNFLSNNTNPNPNPNKSIEVNQPPTDSVSSLNFSPKSNLLVATSWDNQVRCWEVARDGA
NNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIK
DIAWIPEMNLLATGSWDKNIKYWDTRQPNPVHTQQLPERCYAMTVKHPLMVVGTADRNII
VYNLQNPQVEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQAKNFTFK
CHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPVPCSAFNN
DGSIFAYSVCYDWSKGAENHNPATAKPYIFLHLPQESEVKGKPRIGATGRR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttcttatcgaacaacacaaatccaaaccctaaccctaacaaatccatcgag
gtgaatcaacctccaactgattctgtttccagtctcaatttcagtcccaaatccaactta
cttgttgctacttcttgggataatcaggttcggtgttgggaggttgctcgtgatggagca
aataacgttgccactatgcctaaggcttctatagcgcatgatcatccggttttgtgctct
gcttggaaggatgatggcacaactgtcttctctggtggatgtgacaagcaagttaaaatg
tggcctctgttgtctggaggacaaccaattactgtagccatgcacgatgcacctatcaaa
gatattgcttggattcccgagatgaaccttttagccacaggaagctgggacaagaatata
aagtattgggatacaaggcagccaaatccagtgcacacacaacaactcccagagcgctgc
tatgcaatgacagtgaaacatcctctgatggtagttggcactgctgatagaaatattatt
gtttacaatttgcaaaatcctcaggttgagtttaagagaattgtttcacccttaaagtat
cagacaaggtgccttgctgcgttccctgatcaacaaggtttcttggttggatcaatagaa
ggaagagttggagtgcatcatttggatgatagtcagcaggctaaaaacttcactttcaaa
tgccacagagaggggaatgaaatatactcagtcaactctttaaacttccatcctgtacac
cacacatttgctacggctggttctgatggtgcttttaatttttgggacaaggatagtaaa
cagaggcttaaggccatgttaagatgcagccaacccgttccttgcagtgcctttaacaat
gatggttcaatatttgcttactcagtctgctatgactggagtaaaggggcagaaaatcat
aatccggcaacagcaaagccgtacattttcctgcacttgccacaggaatctgaggtcaag
ggaaaaccgcgcattggtgcgactggcagaaggtaa
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