Medicago truncatula (barrel medic): 11429086
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Entry
11429086 CDS
T01716
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11429086
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11429086
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
11429086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
11429086
NCBI-ProteinID:
XP_024634267
LinkDB
All DBs
Position
3:42159256..42161432
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AA seq
151 aa
AA seq
DB search
MLQSERSLRSNLPIIRIPGDGRCMFRSVVYGACLRKGDPPPSLTRQKELADELRAKVVDE
FIKRRVDTEWFLEGDFNTYTVQMRKAQVWGGEPELLMSSHVLQMPITVVMQDTNSNNLKI
IAEYGQEYGKENPIRVIYDGFGHYDVLKCST
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatcagaaagatcactacgtagcaaccttccaataattcgaataccaggagat
ggtagatgtatgtttagatctgtggtctacggtgcctgcctcagaaaaggggacccacct
ccaagtctcaccaggcaaaaagaacttgcagatgagctcagagccaaagttgtggatgag
ttcatcaagaggagagtagacaccgaatggtttcttgaaggtgactttaacacttatacg
gtacaaatgagaaaggctcaagtatggggaggagaacctgaacttctaatgtcgtcgcat
gttttacagatgcctataacagtggtcatgcaggatacgaattccaataaccttaaaatt
atagctgaatacggccaggagtatggcaaggagaaccctattagagtcatctatgatggt
tttggtcactatgatgtactgaagtgttcaacatga
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