KEGG   Medicago truncatula (barrel medic): 11429209
Entry
11429209          CDS       T01716                                 
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mtr03016]
    11429209
Enzymes [BR:mtr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     11429209
Transfer RNA biogenesis [BR:mtr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    11429209
 Prokaryotic type
    11429209
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 11429209
NCBI-ProteinID: XP_003592926
UniProt: Q1SKV8
LinkDB
Position
2:complement(341861..346555)
AA seq 361 aa
MTQLNPKHTVEFEECSDNNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQK
QLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQP
HEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKAQERTYFYRLLSGPETLSTFEK
DRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFP
SVMDRENPINVTDDLHCFHSNSETVIPLGSSARIDEVSASKEDVGFGKRRYHRCLVVTAR
ARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATSPMAPACGLYLGEVKYDLP
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacacagttgaatccgaagcacacagttgaattcgaagaatgcagtgataacaacaat
aggccgtcaaagatttcaaaaattgaagaagagatgaaccaacatcatcatcatcgtaaa
atccaacgttatttggtggcggttgagtacattggaactcgcttctttggttttcagaag
cagctcactgaccgtactgttgctggtgttcttgaggacgctttttgtaaatttgttggc
caacctgtttctgttgtttgttcaagtcgaactgatgctggagtgcatgccttgtcaaat
gtttgtcatgtagatattgaacgaatcagcaaacggaagcctggtgaagtgttacaacct
catgaacctgctgtggttagaagggctgtgaaccatttcttacagaaggaaaacggcgac
ttagcggtcattgatgtacgatgcgttccatcagattttcatgcaagatataaagcacaa
gagcgcacatacttctatcgccttttatctgggccagagactttgtcaacctttgagaaa
gatcgagcatggcatatacctgaggagcttaatcttccagcaatgcaagaagcatgcaaa
gttctagttggacatcatgattttagttccttcagggcgtctggttgtcaggcaaaatca
ccaattagatctttagatgaactcagcgtcgttgaagtaactcgaagtccatattttcca
tctgtaatggatagagaaaatccaattaatgtcactgatgatcttcattgctttcacagc
aattctgaaactgtcattcctcttggctctagtgcaagaattgatgaagtaagtgcatca
aaggaagacgtgggatttggtaaaagaaggtatcatcgttgtttggtagtaactgcacgt
gcacgtgcttttctttaccatcaggttagactacttgttggtgttctcaaagatgttggc
actggaaacataacagttacagatgttgaaagaattttgaatgcaaagactgttacagcc
acaagtccaatggcccctgcatgtggtctctacctgggagaggtgaagtacgatctacct
agttag

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