Medicago truncatula (barrel medic): 11429483
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Entry
11429483 CDS
T01716
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11429483
Membrane trafficking [BR:
mtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
11429483
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
11429483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_VPS8
WDR55
Beta-prop_RIG_2nd
Synaptobrevin
EIF3I
PEP5_VPS11_N
Lgl_C
WD40_MABP1-WDR62_2nd
PQQ_2
mTOR_dom
CaKB
Motif
Other DBs
NCBI-GeneID:
11429483
NCBI-ProteinID:
XP_003616655
UniProt:
G7K253
LinkDB
All DBs
Position
5:complement(36849165..36864692)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFSRFFQKSSPQQSSTQQNVVESSVSSVKFDPRVVLHYGVPSTASILAFDCVQRLIAVGT
LDGRIKVFGGDNIEGIMISPKQTSFKHLEFLENQGFLASVSSNNEIQVWDLRNRQIASAL
QWESIITSFSVIYGTSYMLVGTEHGLVYVLKFESEDRKVNILPYYVPTNVISEAVGMSLD
NVSVARVLHQPCSNGKRLLVAYENGVMLLWDASEDRIVLIRDHKDIELKRKIVASYSDDP
KDEHSDDKLKHEEEDKEISSVSWASNDGSVVVVGYVDGDIMFWDLPTADSPIDQDKKMSN
NVVKLQLSSADRRLPIILLHWHANKTLNRSGGELFVYGGNEIGSEEVLTVLSIDRSCGIE
SLKCTGRIDVALRGSFADMVLLPSDCHAEGDCDMLFVLTNPGQLHLYDKNYLSSLMSEKQ
RKTSSPTMQYAIVIPTLEPQMTTARLDVVCQDVKSFTALSEILVAAKQHSVQNQRSAEIK
WPLVGGVPGQILKEDHLFVQIYIAGYQDGSARIWDASCPALSLVYNIKPEVNDVKMGSAS
FAVSALDFCPNSLHLAVGDESGVVRLYGLRRSSDDINLHFVTENGTEVHNVNQGDGPHCK
AVFSLQNSAVCGLQFANLGGKLVVGYEHGQVAMLDTITSSILFLTSAESPTSAVVSMNAK
FLDTSSLNIPQESVSDISDNSAKGLVFIMTRDAHLVAIDTETGNMVCNRTMSPRVNSNAI
SMHIIDGTSEISAEKLQSHSPQQNDSGTQANIQSENTQDIVETITTIENSYFEQIVLNSL
VLLCYESELSLHSLNIVIEGSNKYIRKVTLVKECCWTTTFRKDDKECVLVVLYQTGDIEL
RSLPSLDVLGEISLMSILRWNLKTDMEKTICSSSIGQIVLVNENEAAFLSLLSCENELWI
PESFPCLHDEVLAAAVDVTVSLSPNQNQKQEAPSIFLNIAKNFKSRKADHDTNQADHNNY
LENLEKCFSSPPFLKPSSGTEDTQDGFELDIDEIQIDEPMAFLSSQKIKIDKKEKAEETD
RQKLLEESSTDAKPRARTTEEIKAKYRKTGDAAAAAALARDKLVERQEKLQMLNDHTEEL
QNGAQDFASMATELARRMENRKWWQL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttttctagattcttccagaaatcatcaccgcaacaatcttcaacgcaacagaatgtg
gtggaaagtagtgtttcttcggtgaaattcgatccgcgagttgttcttcactatggagtt
ccatcgactgcgtctattcttgcgtttgattgcgttcaacggttaatagcagtgggaaca
cttgatggtaggataaaagtatttggtggagacaatattgaagggattatgatttctcct
aagcaaacatccttcaagcatttagagttcttggaaaatcaaggttttcttgctagcgtt
tcaagtaataatgaaatacaggtttgggatttgagaaacaggcaaattgcttctgctttg
cagtgggaatccatcataacttctttctctgttatatacggcaccagttacatgttagtt
ggaactgagcatgggttggtgtatgtgttgaagtttgaatcagaagacagaaaagttaat
atattaccttattatgttccaacaaatgttatatcggaagcagttggaatgtcacttgat
aatgtttcagttgccagagttcttcatcaaccttgttctaatggaaagagactgttggtc
gcatatgagaatggtgtgatgttactctgggatgcttcagaagatcgaatagttctcatc
agagaccacaaggacatcgaattgaagagaaagatagtggctagttattcagatgatcct
aaggatgaacattctgatgataaattaaaacatgaagaagaagataaggaaataagctct
gtatcttgggcatctaatgacggatcagttgtcgtcgttggatatgtagatggtgatata
atgttttgggatttgcctactgctgactctccaatagatcaagataaaaaaatgtcaaat
aatgttgtcaagcttcagttatcatcagcagatagaaggctccctattattctcctacac
tggcatgccaataaaacattgaatagaagtgggggtgaactttttgtctatggtggcaat
gaaattgggtctgaagaagttctgacagttttgagcattgaccggtcttgtgggatagaa
agtctcaagtgcactggccgtattgatgttgcacttcgtggttcttttgctgatatggtt
ttgttgcctagtgattgccatgcagagggagattgtgatatgctatttgtattgacgaat
cctggacaactgcatctttacgacaagaattatttatcttctttgatgtctgagaaacaa
aggaagacttcttcccccacaatgcaatatgccatcgtcattcccactcttgaaccacag
atgacaacagcaaggcttgacgttgtatgccaagatgtgaagtcatttacagccctgtct
gagattcttgtagctgcaaagcagcattcagtacaaaatcagagaagtgccgagataaaa
tggcctttggttggtggtgttccaggtcaaattttaaaagaagaccatcttttcgttcaa
atatacatagcaggttaccaagatggatctgctcggatatgggatgcttcatgtcctgct
ttgtcacttgtttacaacataaaacccgaggtaaatgatgttaaaatgggcagtgcaagt
tttgcagtgtcagcattggatttttgcccgaatagtctacatctggctgttggtgatgaa
agtggtgttgttcgtctctatgggctaagaaggagctcagatgacataaatttgcatttc
gtgacagaaaatggaaccgaagttcataatgtgaatcaaggggatggacctcattgcaaa
gcagtgttttcccttcaaaattctgctgtatgtgggctacagtttgcaaatcttggaggg
aagcttgtagttggatatgaacatgggcaggtggccatgcttgataccattacatcatca
attctgtttcttacaagtgctgaatctcccacgtctgcagtagtttctatgaatgcaaaa
tttttagacacgtctagcttaaacattccacaggaatctgtatctgatatttctgacaac
tctgcaaaggggctagtgttcattatgacaagggatgcacacttggttgcgatagatact
gaaacagggaatatggtttgtaataggacaatgagcccaagagtaaactcgaatgcaatt
tcaatgcacattatagatggtacttctgaaatatctgctgaaaaactgcaatcccactct
cctcagcagaatgattctggaacacaagctaacattcaatctgaaaatacacaagacata
gttgagactattactaccattgaaaattcatactttgagcagatagtattgaactcgctc
gttttactttgctacgagagtgaattgagcttacactctttgaatattgtgattgagggt
agcaataagtacataaggaaggtaacccttgtaaaagaatgctgctggactactaccttc
cgaaaagatgacaaagaatgtgttctggttgttctgtaccaaactggagacattgagtta
aggtccttacctagtctggacgtgttgggagaaatctctttaatgtcaatcctaagatgg
aacttgaagactgacatggagaagacaatatgttcttcatcaattggacaaatagttctg
gtcaatgaaaatgaagctgctttcttgtccctgttgtcctgtgaaaatgagctctggatt
ccagagtcttttccttgtcttcatgatgaagttcttgcagctgcagtagatgttacagtg
agcctatctccaaaccaaaatcaaaaacaggaagcaccttctatcttccttaatatagct
aagaacttcaaatcgaggaaagccgatcacgatacaaatcaagcagatcataataattat
ttggaaaatttagaaaaatgtttctccagtcctccattcttaaagccttcttcagggacc
gaagatacgcaggatggttttgaacttgacatagatgaaattcaaattgatgagcctatg
gcttttttatcgtctcagaaaatcaagattgacaagaaagaaaaagcagaagaaacagac
agacagaagttacttgaggagtcctccactgacgcaaaaccaagagctagaacaactgaa
gaaattaaggctaaatatagaaagactggggatgccgcagcggcagctgcacttgcaagg
gataagcttgtagagcggcaagaaaaactccagatgctcaacgatcatactgaagagttg
cagaatggggcacaagattttgcttccatggcaactgaacttgctagaagaatggaaaat
cgtaaatggtggcagctataa
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integrated database retrieval system
