Medicago truncatula (barrel medic): 11429529
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Entry
11429529 CDS
T01716
Name
(RefSeq) retinoblastoma-related protein
KO
K04681
retinoblastoma-like protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11429529
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
11429529
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
11429529
NCBI-ProteinID:
XP_003627961
UniProt:
G7LHL2
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All DBs
Position
8:complement(15472135..15479674)
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AA seq
1025 aa
AA seq
DB search
MSPSAETEMEDTKLSVVENGDQAVSRFAEFSKNELALDEKSCKEAMDLFGETKHLLMANV
SSMGNGTIEEAERYWFAFILYSIKRLTQKNEESEKEEIENTGLTLCRILRAAKLNIADFF
KELPQFVVKAGPILSNRFGSDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDANV
ENKSSVTGRVSECHRFGWLLFLALRVHAFSRFKDLVTCTNGLISIMAILIIHVPARFRNF
NIHDSARFVKKSSKGVDLLASLCNIYNTSEDELRKTMEQANNLVADILKKTPCLASECET
ENLEDFDKDGLTYFKDLMEESSLASSLNILENDYDQMTRNKGELDERLFINEDDSLLASG
SLSGGSSVSAGGVKRKYDLMMSPAKTITSPLSPQRSPASHANGIPGSANSKIAATPVSTA
MTTAKWLRTVISPLPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGDRCVT
GSLQSANLMDNIWAEQRRLEAMKLYYRLLATMCRAEAQILGNNLTSLLTNERFHRCMLAC
SAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLL
ESLVWEKGSSMYNSLAVARPALSAEINRLGMLAEPMPSLDEIAMQINFSCGGLPPVPSLP
KPETLPAQNGDMRSPKRLCTENRNVLVERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFA
SPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYSLFQRILN
QWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSA
RRNGGSRHRTGQEHIDIISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANNKNDGHLV
QNPGSPRISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAY
QSPSKDLTAINNRLNSNRKVRGPLKFDDVDVGLVSDSMVANSLYLQNGSSASSSGAPLKS
EQPDS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcagctgaaacggagatggaagatactaagctttctgttgtcgaaaatggt
gaccaagctgtttctcgttttgctgagttttcaaagaatgagctagcattggatgagaaa
agctgtaaagaagcaatggatctgtttggagaaaccaaacatcttctcatggcaaatgtt
tcatcaatgggaaatggaacgatagaagaagcagagcggtactggtttgcttttatttta
tactctatcaagaggctgactcagaaaaatgaggaaagtgaaaaagaagagattgagaat
accggtcttaccttgtgtcgaatattgagagcagcaaagcttaacattgcagattttttt
aaagaacttcctcagtttgttgtcaaagctggtccaattttaagcaatcgattcggctct
gattgggaaaacaagcttgaggcaaaagagatgcatgctaacactattcacctgaagatt
cttagcaagtattataagcgtgtatttgaagagttcttcgtgtcaactgatgcaaatgtt
gaaaataagtcgtctgttacgggccgtgtatctgagtgccatcgttttggatggttactt
ttcttggcccttcgtgtacatgctttcagccgttttaaagacttggtgacttgcaccaat
ggtttaatttctatcatggctatcctaattattcatgttccggctcgttttcggaatttc
aacattcacgactctgcacgctttgttaagaaaagcagtaaaggtgtggacctccttgct
tcactttgcaacatatataacacttcagaagatgagttgaggaaaaccatggagcaagcc
aataatttagtagcagatatattgaagaagacgccctgtttggcatctgaatgtgaaact
gaaaacctagaggattttgataaagatggtttgacttattttaaagatctcatggaggaa
tcatctctggcgtctagtttgaatatcttagaaaatgattatgatcaaatgactcgcaac
aagggtgaactggatgaaaggttattcattaatgaggatgacagcctgctagcttcagga
agtttgtctggaggttcttcagtttcagcaggaggtgtaaagaggaaatatgatttgatg
atgtcacccgccaagaccattacaagtccactttcaccccagcgctctcctgcatcccat
gctaatggcattccaggtagcgcaaattcaaagattgctgccacccctgtaagcacagca
atgactactgcaaagtggcttcgaactgtcatttctccacttccatcaaagccgtcacaa
gagctagagcgattcttgacttcatgcgacagagatattactagtgaggtagtacgcaga
gcacagattatattacaagctatatttcctagtagtccccttggcgaccgatgtgtaact
ggaagcctgcaaagtgctaatctcatggacaatatatgggccgaacaacgaagattagaa
gccatgaagttatactataggttgttggcaacaatgtgccgagcagaagctcaaatactt
ggcaacaatttaacttcactgctcactaatgagaggttccataggtgtatgcttgcatgt
tctgcagaattagtcctggctactcacaagactgtgacaatgttgtttcctgctgtactg
gagaggactggaataacagcttttgatcttagcaaggtgatagaaagtttcattagatat
gaagaatctctcccaagagaattgaggcgacatcttaattcattggaggaacggcttttg
gagagcttggtatgggaaaaaggttcttcgatgtataattcattagcagtcgctagacct
gccctttctgcagaaatcaatcggcttggtatgttagccgaaccaatgccatcattagat
gaaattgcaatgcaaattaacttctcttgtggaggactgcctcctgtgccttccttgcct
aagcctgagactttgcctgctcaaaatggggatatgagatcaccaaagcggctctgtaca
gagaatcgaaatgttttagtggaacgaaattcttttacttcaccggtgaaagatcggctt
cttcacttaagcaaccttaaatcaaaactactcccacctcctttgcaatcagcatttgcc
agtccaacaaagccgaatccaggaggtggaggagaaacatgtgcagaaactgggatcagc
gtcttttttagcaagattgttaagttgggagcagtcagaataagcggaatggttgaaagg
ctacaattatctcagcagataagggagaatgtatactctcttttccagcgaatcctaaat
caatggacatctctcttcttcaaccgtcatattgaccaaatcattttgtgttgcttctat
ggagtagcaaagatttcacaactgaacctaacttttagggagattatatacaactacaga
aagcaaccacaatgcaagccacaggttttccgtagtgtatttgttgactggtcgtcggca
cgccgtaatgggggatctagacatagaacaggacaggagcacatcgatatcatttcattt
tacaacgaagtttttattccctctgtaaagccacttctggttgaacttggccctggtgga
gcaactgtgagaagtgatcaagtacccgaagctaacaacaaaaatgacggccatttagtt
caaaatccgggatctcctagaatatcacctttcccaagccttcctgatatgtcccctaaa
aaagtgtctgccgcacacaatgtgtatgtgtctccattacggtcatctaagatggatgct
ctaatttcacatagctccaaaagctattatgcatgtgttggggagagcactcatgcctat
cagagcccttcaaaagatctgactgccataaacaatcggttaaacagcaaccggaaagta
agaggacccctcaagtttgatgacgtcgatgtgggcttggttagcgactctatggttgca
aacagcctctatctgcagaatggaagttccgcgtcatcatcgggtgcaccgttgaagtct
gagcaacctgactcttaa
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