KEGG   Medicago truncatula (barrel medic): 11429595
Entry
11429595          CDS       T01716                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11429595
Transcription machinery [BR:mtr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     11429595
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-GeneID: 11429595
NCBI-ProteinID: XP_003588449
UniProt: G7I282
LinkDB
Position
1:complement(342413..346704)
AA seq 549 aa
MGLCFGFRLNTKLRYSTVPLHHSSPFFSNSHIFLSSSSSAGGRETLFNPVRLSLLSTVYE
EGETLQKDFRKTFAFSSALEAPEKDLLQGGELTKVNKGKRSLSSVHEMIDNSHLPFEESH
FGLLMENLGVLEETFADSEALRLEKNIILQLEKLGALELFNVCLTTSFGTSCISNCTHKV
LEQVEENKRNHKVDDYTGKVIVHSSKRKENRRRKRGSVSIAPSSRSLPLDDNQEDPLRSS
PASFVKRASNTKNKRAVIAQREVEMSKGVKVLAELEKIRTAIEEDTKQVVSLSSWAETSG
VDEKVLQQQLYHGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERF
DSTKGYRFSTYVQYWIRKSMSRMVAKYARGITVPWSMNKAISQIQKARKVLKNTTMKYPN
DLEIAKMTGLSLDKIMSASHCLRTVSSMYRGIEYMGHMPDLSIESPEETVMKQHIKKDIH
DILQSLDSRERQIIILRFGLNDDHQPKSLEYIGKIFKVSKEWIRKIEKKALTKLRNETNI
SKLNYYLDL
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgggtctctgttttggttttagactaaacacaaaactcagatatagtactgtccctctt
caccactcttctcctttcttctccaattcacatatcttcctctcttcttcatcttctgct
ggaggcagggaaactttattcaaccccgtgaggttgtctttgctttcaacagtttatgag
gaaggagaaactttgcagaaagattttcgaaagacatttgcattttcatcagcattggaa
gcaccggaaaaagatttattgcaaggaggagaactaacaaaggtaaataaaggaaagagg
tcgcttagcagtgtgcatgaaatgatagataactcgcatttaccttttgaggagtcacat
ttcggtttgttaatggagaaccttggtgttttagaagaaacttttgctgattctgaagca
ttgaggttggaaaagaatattatattgcaactagaaaagcttggagctcttgagttgttc
aatgtttgtctaacaacatctttcggaacctcatgcatatcgaactgtactcacaaagtt
cttgaacaagttgaagagaataagagaaaccacaaagtagatgactatacaggtaaagtt
attgtccattccagcaaaagaaaggaaaatagaagaagaaagagaggatccgtttccata
gcaccttcctctcggtccttgcctttagacgataatcaagaagatccattacgttcttca
ccggcttcttttgtaaaaagagcatcaaatactaaaaataaaagagcggtgattgctcaa
agggaggtggaaatgtcaaaaggtgtaaaggttctagcagaattagagaaaattagaaca
gctatagaagaggatacaaagcaagtggtaagcttgagtagctgggcagaaacatctgga
gttgatgagaaggtgctacaacagcaactgtatcatggctattattgtagagatgagttg
atacggagtactcgttccttagttctatactttgctagaaaatacaggggtatgggaata
gctttggaagatttgcttcaggtaggatatattggtgttctccaaggagcagagcgattt
gacagtacaaaaggataccgattctcaacctatgtgcagtactggataaggaaatcaatg
tcaagaatggtggcgaaatatgctcgaggaatcactgttccttggtcgatgaacaaggca
ataagtcagatccagaaagcacggaaggtcttgaaaaatacgaccatgaaatatcccaat
gatcttgaaattgctaagatgacaggtctttcactggacaaaatcatgtcagctagccat
tgtctaagaacagtttcttcaatgtatcgtggcattgaatacatgggtcatatgcccgat
ttgtcgatagagagtcctgaagagactgtcatgaaacaacacattaagaaagatatacat
gatatcctccaaagcttggactcaagggaaaggcaaataataatcctacgattcggcctt
aatgatgatcaccaacccaagtctcttgaatatatagggaagattttcaaagttagcaaa
gagtggataaggaaaatagagaaaaaagctctcacaaaattaaggaatgaaacaaacatc
tcaaagttgaattattatttggatctgtag

DBGET integrated database retrieval system