KEGG   Medicago truncatula (barrel medic): 11429668
Entry
11429668          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    11429668
   04120 Ubiquitin mediated proteolysis
    11429668
  09126 Chromosome
   03083 Polycomb repressive complex
    11429668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11429668
   04121 Ubiquitin system [BR:mtr04121]
    11429668
   03036 Chromosome and associated proteins [BR:mtr03036]
    11429668
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    11429668
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     11429668
   Cul7 complex
     11429668
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     11429668
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     11429668
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 11429668
NCBI-ProteinID: XP_003605505
UniProt: G7JN65
LinkDB
Position
4:11645596..11646090
AA seq 164 aa
MSDGVESSTATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKI
LAMVIEHCKKHVDATSSDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLT
CKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFDE
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgacggtgttgaatcatcaacggcgacgaagaagatcacactgaagagttccgac
aacgagaccttcgaaattgaaaaggcggtggcattagaatctcaaacgatcaagcatttg
atcgatgacaattgtgccgacgacagtggaatccctcttccaaacgttaccggcaagatc
ttggctatggttattgagcattgcaagaagcatgttgacgctaccagttctgatgaaaag
ccctctgaagatgaaattaacaaatgggacactgaattcgtcaaggttgaccaagatacc
ctcttcgatctcatcttggctgcaaactatctaaacatcaaaagtctgctggatcttaca
tgcaagactgtagcagacatgatcaagggtaggacgccggaggagattcgtaagactttc
aacattattaatgattacactccggaggaagaggaggaagtccgtagcgaaactcaatgg
gcttttgacgaatga

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