Medicago truncatula (barrel medic): 11429703
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Entry
11429703 CDS
T01716
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11429703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11429703
03036 Chromosome and associated proteins [BR:
mtr03036
]
11429703
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
11429703
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
11429703
PBAF complex
11429703
GBAF(ncBAF) complex
11429703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
11429703
NCBI-ProteinID:
XP_003616869
UniProt:
G7KH84
LinkDB
All DBs
Position
5:37951364..37952721
Genome browser
AA seq
433 aa
AA seq
DB search
MASSTPNITVEPPSSAIETPQPITSSDANLILVPSHSRWFSWDSIHECEIRNIPESSKNP
RVYKYYRNSIVKFFRFNPNRKITFTDVRKIIVGDVGSIRRVFDFLEAWGLINYHPSSSLS
KPLKWEDKDAKSDAASNSTESPSLVPANEAKRICSVCMDCFACDKNNRKLCARCFIRGNY
RIGMSNTKFKRVEISEETKNEWTEEETLNLLEAITNFGDDWKRVSHQVVGRTDKECVARF
LELPFGDQLKPPVDAEWESEIVGSGKSSKRMCLTPLNDAINPIMAQAAFLSALAGTEVAQ
AAAQAALTSLSIVYKSTRINYRSFPRNTLQQDASVASDGGNASDSIQGSLLRANLQLEKE
ESDVEKDIYEVIDVQMKNIQDKLINFEDLDVLMEKERQQLEQTKSLFFLDQLNLLFRKTS
APTTGEGNHVKSN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcaacgccaaatataaccgtcgagcctccgtcttccgccatcgaaacaccg
caacccataacctcgagcgacgccaacttaatccttgtccctagccactcaagatggttc
tcatgggattccattcacgaatgcgaaatccgtaacattcccgaatcttccaagaaccct
agggtttacaaatactacagaaactctatcgtcaagtttttcagattcaatcccaacaga
aaaatcacattcacagatgttcgcaaaatcatagtcggtgacgttggttccattcgaaga
gtctttgattttcttgaagcttggggtttaatcaattatcatccttcttcttcgctcagt
aaacctctcaaatgggaagataaagatgctaaatcggacgcagcgtcaaattctacggaa
tctccttctctggtgcctgccaatgaagctaagagaatctgcagtgtctgcatggattgc
tttgcctgtgataagaataataggaagttgtgtgcgaggtgtttcattcgtgggaactat
cgaattggtatgagtaatacaaaatttaagagagtggagataagtgaggagacaaaaaat
gaatggactgaggaggaaacactgaatcttcttgaagctattacaaatttcggggatgat
tggaagagggtttctcatcaagttgttggtaggaccgacaaggaatgtgttgctcgtttt
ctagagcttccttttggcgatcagttgaagcctcccgttgatgctgaatgggaatccgaa
attgttgggtcgggtaaatctagtaagagaatgtgtctcacacctcttaatgatgctatc
aatcctatcatggctcaggctgctttcctttctgctttggcagggacggaggttgcacaa
gctgcagctcaagctgctctgacaagtttgtccattgtttacaaatcaactagaattaat
taccggtcatttccaaggaatacattgcagcaagatgcttctgttgcatccgatggtggt
aatgcttcagattctatccaaggatctctattgcgtgcaaatttacagcttgagaaggaa
gaatcagacgtggaaaaagatatttatgaggttatagacgttcagatgaaaaatatccag
gacaagcttatcaattttgaggatttagacgtgctgatggaaaaagaacgccagcagttg
gagcaaacgaagagtttgtttttccttgatcagctcaatcttttatttcgtaaaacatct
gcaccaacgaccggagaaggcaatcatgtaaaaagtaattga
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