Medicago truncatula (barrel medic): 11429833
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Entry
11429833 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11429833
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11429833
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11429833
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11429833
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11429833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
11429833
NCBI-ProteinID:
XP_003602929
UniProt:
G7J555
LinkDB
All DBs
Position
3:complement(49663775..49670736)
Genome browser
AA seq
1116 aa
AA seq
DB search
MRVTGDLGFRSLVLVVVCVVVPVIGFVIRRKWQIAVARNEEIKRLLILAAEETARVERET
LYSSGAVVSATNNYQCALCYFPATARCAKCKSVRYCSTGCQTVHWHQGHKFDCRPPSKTH
RSNGVSDIGKRELEHDYSGNHEEKSENRGAECKIPYEDTGFSPEVSFGKDDNIRAGFLAE
ENLADSNSEFSSNSFSGFSASTSSGDSSDDSSVCESIISNEHDISEGHVSVAHTLDLTDK
TTIDSKVDAAMSSSPKFASLLDSVDGSSTVHKLNHVAPGSSNEERKVGSNGALGSSIGKG
AKIEPSGFWDKALDSRGIKDDTYPSHSDESAGEKTDSGLSFRFQFSTTPPLHIQDTKAKE
SSNDDTLPNPVGKNMPHPGPASSENVIHSSKARNLSFINGKDANIMSTTPGGSEHDQLES
KDRSEPPLYSFSSQTSSIGKDPGSADAMSIHNFQSSSSVASNHVMDNHGCTLKSTDIRCQ
TRGLADSKLVSTIEVNSHPGTKHRKNEYGTVTSSHAASYSANSKSGLKTSVLKVVDQFRG
SNLSKHVPSAARSDIAGKYNDKGFFPYETFVKLYNSNKVELRPFGLINIGNSCYANAVLQ
CLAFTPPLSAYLVQGLHSKSCSNKTWCFICEFERLIFKSKDTKSPLSPTGILSQLQSIGS
QLGNGKEEDAHEFLRHAIDTMQSVCLMEAGINASGSSEEDTTLMGQTFGGYLRSKIKCMK
CGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYQKAKKKLT
VSEAPNILTVALKRFQSGKFGKLNKPVQFPEILDLAPFVSGTSDKTPIYRLYGVVVHLDV
MNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNR
ILSQDSNSKVNGKSTKARSTSSNSGAAEPISSSVSPDGSPTLESFYSRFHHLKKILEEDS
SSDSSSLFSSNSDEGSCSTDSTRDSTSMDDFSDYIFGDSGRGWSSTWRNSDSDTSSSSSP
LNCRQSPLSDMDKYDSVSPEATNFRIPTGSSAKTDRDDVISHLHSDTILQHRKLDSSSIS
SNSSSKDADSFLKLGSNHSNDKNSVVSSRKSRKRTE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccggggatctagggtttaggagcctggtccttgtggtggtttgtgtggtg
gttccggtgatcggatttgtaattcgtcggaaatggcaaattgcggtggctagaaatgaa
gagatcaagaggctcttgattttggctgctgaggaaactgccagggttgagagagagacg
ttgtattcctccggtgcggtggtttccgccactaacaattatcaatgtgctctctgctat
tttcctgccactgcgcgctgcgctaagtgcaaatctgttcgatactgctctaccggttgc
caaacagttcattggcatcagggtcataaatttgattgtcgtcctcctagcaaaactcat
cggagcaatggcgttagtgatattggaaagagggaattggagcatgattactctggtaac
catgaggagaaatctgaaaacagaggtgcagagtgtaaaataccctatgaagataccggc
ttttctcctgaggtttcatttggaaaggatgataatattcgtgctgggttccttgcagag
gaaaatttagcagattctaattctgaattttccagtaactcattttctggattttcggct
tccacaagttctggtgattcatctgatgattcgtctgtctgtgagagtatcatctcaaat
gagcatgacatatcagagggacatgtttctgttgctcacacccttgaccttactgataaa
accacaattgatagcaaggtggatgcagcaatgtcttcttcaccaaagtttgctagtttg
cttgattcagttgatggttcttctacagttcataagttaaatcatgtcgctcctggttct
agtaatgaagagaggaaggttggatcaaatggtgccttaggctcgagcatagggaagggg
gcgaaaattgagccttctggattctgggataaagctcttgactcgagagggattaaagat
gacacttatccatcccattctgatgaatcagctggtgaaaagaccgactctggattgtca
tttcgctttcaattcagtaccacacctcctttgcatatacaagataccaaggctaaagaa
tcttcgaatgatgacactcttccaaaccctgttgggaagaatatgccacatccaggacca
gcatcatctgaaaatgtaattcattcttcaaaggcaaggaacctctcattcatcaacggc
aaagatgccaatattatgagcactactcccggtggttctgaacatgatcaattagaatct
aaagacaggtctgagccgcctctatattctttttcctcccaaacctctagtattggcaaa
gatccaggttctgcagatgctatgagcatacataactttcaatcatctagctctgtggca
tcaaatcatgttatggacaaccatggctgcaccttgaagtctaccgatattagatgccag
acacgtgggcttgctgattctaaattagtttctacaattgaagtaaattcacatcccggt
acaaaacataggaagaatgaatatgggactgtcacttcttctcatgctgctagctattct
gcaaattctaagagtggcttgaaaacatctgttttaaaagttgttgatcagtttagagga
tcaaatttgtcaaagcacgttccttcagcagccaggagtgatattgctggaaaatacaat
gacaagggtttttttccatatgaaacatttgtcaagctttataactccaacaaggtggag
ttgcgcccattcggtcttataaatattggaaacagttgttatgctaatgctgtacttcag
tgcctagcttttacaccacccttatctgcttatttggttcaaggactgcactctaaatca
tgttcaaataaaacatggtgtttcatctgtgaatttgaaagattgattttcaagtcaaag
gatacaaaatctccactatctccaacaggcatactttctcaactacagagtattgggagt
cagctcggaaatggcaaagaagaagacgctcatgaatttctaaggcatgctattgacaca
atgcaatctgtatgccttatggaagctgggattaatgcatcaggttcatcggaagaggac
actactttaatgggtcaaacatttggaggataccttcgatcgaagataaaatgcatgaaa
tgtggtgggaagtccgagcgtcaggaaaggatgatggatctaactgttgagatagaaggg
gagatatcaacacttgcggaggcccttcgaaggtttacaagcactgagactttggatgga
gaaaacaagtaccactgtgtcaggtgtaaatcttatcagaaggccaagaagaagctgaca
gtttcagaggcacccaatattcttacagttgcattgaagagatttcagtctggaaaattc
gggaagctcaacaagcctgttcaatttccggaaatacttgacctggcacctttcgtgagt
gggaccagcgataagacacccatttacagattgtacggagtggttgttcatttggatgtt
atgaatgcttctttttcgggtcactatgtgtgctacttgaagaatattcaaaataaatgg
ttcaaggttgacgacagtgtggtaacagcagttgaattagagagagtcttgacaaaagga
gcatatatgcttttttatgcaaggtgctctccaagggccccaaaattgatcagaaacagg
atactatcccaagattcaaatagtaaggtcaatggaaagtctacaaaagcaagatctacg
tcatcaaattctggtgcggctgaacccatcagtagttcagtatctcctgatggctcaccc
accttggagtctttctattcaaggtttcaccacctgaaaaagattttggaggaagactca
tcaagtgatagttcatcccttttcagcagtaattccgatgaaggttcttgcagtactgac
agtacccgtgattcaactagcatggatgacttctccgattatatttttggtgattcaggg
cgcggatggagtagcacgtggaggaattctgattctgacacatcttcctcctcatctccc
ttgaattgtagacagtcgcccctatctgatatggacaagtatgattcagtttctccagag
gcaactaattttcggattcccaccggttcaagtgcgaagacagatagggatgatgttatt
tctcatttgcattctgacacaattttacagcatagaaagttggatagtagtagcattagc
agcaatagtagtagtaaggacgctgactcatttctgaaactaggatctaaccattcaaat
gataagaactctgttgtatcaagtagaaaatcaaggaaaagaacggaatga
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integrated database retrieval system
