Medicago truncatula (barrel medic): 11429959
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Entry
11429959 CDS
T01716
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11429959
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
11429959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
11429959
NCBI-ProteinID:
XP_003617396
UniProt:
G7KD27
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Position
5:complement(40878720..40889099)
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AA seq
606 aa
AA seq
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MKKGRDLFFFTTCRTLHKTPNSSNSITATAFHETMQSSDHNSSHSQRYSFNPTLNWNPQL
HNYFINAYGSDHFSRISSALTRPSRYSCIRVNTLCSTSDAVIEKLRSTVKEKLNGSDCED
VDDAVNPLKEDLDSDSSLLFKCKIPGLDYVVFVWGSGPHHVDYGNVAPKEVIVSRKCAEA
VLRGAQVYVPGIMACSAHVEKGDTVAVSVAIEQQGSDGGWSSGMTRGIVLQGSETDPYYL
ERNGLYIGQGTAMLSRAGMFRVTEGLGVDMKDRVYELHSFHNVLEGEIFLQNLPSIIAAH
ALDPQMGERILDMCAAPGGKTTAIAILMKDKGEVIATDRSHNKVLDIEKLAAELGLSCIK
AFKLDALKSVSQRNDIDTCHNNATNDVKNQVSSNLQVERMSPLVTESFKTETLEENGKGE
KAREGAYPSKAEIRKSMRRARNGPGRNQSGGGRVDISKGFEPDSFDRVLLDAPCSALGLR
PRLFAGEDTIESLRSHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKY
KYLSLAPQHPKIGGPGLVGSCEFPDGYAEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA
VGSKDT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagggagggacttgttcttcttcaccacttgcagaacccttcacaaaacccca
aactcatccaactccatcaccgccaccgcatttcacgaaacaatgcaatcttccgatcac
aattcttctcattcacaacgctactccttcaatcctacccttaactggaaccctcaactt
cacaactacttcatcaatgcttatggctccgatcacttctctcgcatctcctccgcttta
acgagaccttcgcgatattcgtgtattcgagtaaacacgctttgttcaacgagtgatgct
gttattgagaagctaagatcgactgtgaaggaaaaattgaatggaagtgattgtgaagat
gttgatgatgcggtcaatcctttgaaggaggatttggattcagattcaagtttattattt
aagtgcaagattcctggattggattatgttgtttttgtttggggttcgggaccgcatcat
gttgattatggtaatgtagctcctaaagaggttattgttagcaggaaatgcgctgaagct
gttctgaggggagctcaggtgtatgttcctggtataatggcttgtagtgctcatgttgag
aaaggagatacagtcgctgtctcggttgcgatagagcagcagggttcagacgggggctgg
agttctggtatgacgcgcggtattgttcttcaaggatccgagacagatccatactatctt
gaacgaaatgggctatatattggccaaggaactgcgatgttgtcaagggctggaatgttt
cgggttactgaaggacttggtgtggatatgaaggatagagtatacgaacttcattctttt
cacaatgtgcttgagggcgaaatatttcttcaaaacctgccaagcattattgctgctcat
gcattagatccacaaatgggtgagcggatactagatatgtgtgctgcaccaggagggaaa
acaactgcaattgcaatacttatgaaggataaaggagaggtcattgcaactgatagatct
cataacaaggtgctggatattgagaaattagcagctgaattgggcttgagttgcattaaa
gcattcaagttagatgctcttaaatctgtttctcaaagaaatgatattgatacatgccac
aataatgccacaaatgatgtgaaaaatcaagtgtcttcaaatttgcaagtagaaagaatg
tcacctcttgttaccgaaagttttaaaactgagactttggaggaaaatggtaaaggtgaa
aaggcacgtgaaggagcttatcctagcaaagctgagatcagaaagagcatgagaagagcg
cgaaatggacctggtagaaatcagagtgggggtggcagggttgatatatcaaaaggtttt
gaacctgacagttttgatagagttcttcttgatgctccctgttctgcccttggtttaagg
cctcggttatttgctggagaggacacaattgaatctttaagaagccatgcaaaataccag
agaaggatgtttgaccaggctgttcaattagtacgacccggtggagtaatagtctattcc
acttgtacgataaatcctggcgagaatgaagcattagttcgatatgctttggataagtac
aaatatctgtcattggcaccacagcacccaaaaattggaggacctggtcttgttggtagc
tgcgaatttcctgatggatatgcagaggaatggttgcgacctggtgaggaagaccttgtt
caaagattcgacccatcatctccccttgatactattggattcttcattgctaagtttgct
gtcgggtctaaagatacctga
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