Medicago truncatula (barrel medic): 11430016
Help
Entry
11430016 CDS
T01716
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11430016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11430016
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11430016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
11430016
NCBI-ProteinID:
XP_024626359
LinkDB
All DBs
Position
7:complement(51338152..51342821)
Genome browser
AA seq
300 aa
AA seq
DB search
MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED
AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS
SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS
YVRVREYDSRRDSRSPGRGPSHSRGRSYSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQRS
PAKSPAKSVSRSRSRSRSRSLSGSRSRSRSPLPLRNKSPKKRSASRSPSRSRSRSKSLSR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacattcgagcagaaccgtgtatgttggaaatctacctggcgatatccgtgaa
agagaagttgaagatttgtttatgaagtatggacacataactcacattgacctaaaggtt
ccgccaaggccccccggctacgcatttgttgagtttgaagatgttcaagatgccgaggat
gcaattcgcggtcgtgatggttatgattttgatgggcaccgattacgggtggaggctgca
catggtggtcgtggcaattcatcttcaagagatcgatacagcagtcacagcaatggccga
ggtggacgcggggtatccaggcgctctgaatatcgtgttatagtcaatggactgccctct
tctgcatcctggcaggatcttaaggatcacatgcgaaaagccggggatgtttgcttttcc
caagtttttcatgatggaaggggtactactgggattgtggattacacaaactacgatgat
atgaaatatgctatcaaaaagcttgatgactctgagttccggaatgctttttccaagtct
tacgttcgtgtgagggaatatgattcgaggcgggactctagaagtcctggtcgtgggcct
tctcattctagaggaagaagctatagccgcagtcgtagtcgcagccgcagccatagccgt
agctacagtccaggccatagcagaagcaaatctcctaagggtaaatcctcacaacggtca
ccagctaaatctccagcaaaatcagtttctcgctctcgctccagatctagatcccgttct
ttatcaggatcacggtcaaggtctaggtctccattgcctctgcgtaataaaagccccaaa
aagcgcagtgctagcaggagtccaagtaggagcaggagccgtagcaagagtttgtccagg
tga
DBGET
integrated database retrieval system
