Medicago truncatula (barrel medic): 11430059
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Entry
11430059 CDS
T01716
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11430059
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
11430059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_2
TPR_12
RPN7
TPR_MalT
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
11430059
NCBI-ProteinID:
XP_003616084
UniProt:
G7K5W1
LinkDB
All DBs
Position
5:complement(33643446..33653238)
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AA seq
728 aa
AA seq
DB search
MEAIAEGLWGLADHHENRGEIAKAVKCLEAICQSEVSFFPIVEVKTRLRIATILLHHSHN
ANHAKSHLERCQLLLKAIPSCFELKCRAYSLSSQCYHLVGAIQPQKQVLFKGLDLAAASA
GNGNNEISTKLWSCNFNSQLANALSIEGDYRGSISALECGYACATEVRYPELQMFFATSL
LHAHLMQWDDDNLVEQAVNKCNEIWESIQPDKRQQCPGLLFYNELLHIFYRTRVCDYKNA
APHVDNLDAAVRAEKRQTQHMQELVKELSVLDQSLSRSDLHYRERAALSEKQAMIQEQLR
NMNGFSSIGRDSLEPVYFGNGRRTLGDKLQLAPPPIDGEWLPKSAIYALVDLITVVFGRP
KGLFKECGKRIQSGMRIIQDELLKLGITDGVREVDLQHSSIYMAGVYLMLLIQFLENKVA
IELTRAEYAEAQQALVQMKNWFMRFPTILQPCECIIEMLRGQYAHSVGCYNEAVFHYIEA
VKLTDSKSMQAMCQVYAAVSYICIGDAQSNSQALDLIGPVYEVMDSFVGVREKTGVLFAY
GLLLMKQQDLQEARIRLAKGLQLTHTYLGNLQLISQYLTTLGSLAIVLRDTVQAREILRS
SLTLAKKLCDVPSQIWVLTVLTALYKELGERGNEMDNADYQTKKSEDLHKRLADAQASIY
HIEIIERVRFEVPQLHELEIKRAMAGPSMGVNNLDIPESIGLPAQAPVPSSMLVDIDGSG
RRHGKWRI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaatagcagaaggactatggggattagcagaccatcacgaaaaccgaggagaa
atagcaaaggcagtaaaatgtctagaagcaatctgtcaaagcgaagtttccttcttccca
atcgttgaagtcaaaactcgtcttcgtatcgccacaatccttcttcatcattctcataac
gctaatcacgctaaatctcacctcgaacgttgtcaattgttgttgaaggctataccgtct
tgttttgagttgaaatgtagagcttatagtttgtcgagtcagtgttatcatcttgttgga
gctattcaacctcagaaacaggttttgtttaagggtcttgatcttgctgctgcttctgct
ggaaatggaaataatgagatttcaacaaagttgtggtcttgcaacttcaactcacagctt
gcaaatgctttgtcaattgaaggagactaccggggttcaatctccgccttagaatgtgga
tatgcctgtgctactgaagtacgctacccagagttgcagatgttctttgccacttcatta
ttgcatgcccacctcatgcaatgggatgatgataatttggttgagcaagctgttaataaa
tgcaatgagatttgggagtcaattcagccagataaaagacagcaatgccctggcttgctc
ttttataatgaattactgcacatattctatcgtacgcgggtatgtgattacaagaatgct
gcaccccatgttgacaatctggatgctgctgtgagggctgaaaagaggcaaacacaacat
atgcaagagctagtgaaggagctcagtgttttagatcaaagtctttccaggtctgatctt
cactacagggaaagggcagcgttgtctgaaaagcaagcaatgattcaagaacagctgaga
aacatgaatgggttcagttcaattgggagggactctcttgaaccagtatattttgggaat
ggcagaaggacactaggagataagcttcagttagcaccacctcctattgatggggaatgg
cttcctaaaagtgctatctatgcactagttgatctgataactgttgtatttgggcgccca
aaaggactttttaaggagtgtggaaagcgcatacagtcggggatgcgtataattcaagat
gagttattgaagcttggaattactgatggtgtcagagaagtggacttgcaacactcttct
atctatatggctggagtatacttaatgcttctaattcagtttcttgaaaacaaagtggcc
atagagctcacacgagcagaatacgctgaagcgcagcaggctttggtacagatgaaaaat
tggttcatgcggtttccgactatattacagccatgtgaatgcatcattgagatgcttaga
ggccaatatgctcattctgttggctgttataacgaagcagtctttcattacattgaagca
gtcaagctcacggacagcaaatcaatgcaagctatgtgccaagtttatgcagctgtttct
tatatctgcattggtgatgctcaatctaattcacaggcacttgatttgattgggccagtt
tatgaagtaatggattcttttgtaggagttagagagaaaacaggtgttctttttgcttat
ggtcttttattgatgaagcagcaggatctacaagaagcaagaattcgcttggcgaaggga
ttgcagctgacacatacttatttggggaaccttcaacttatttcccaatatttaacaacc
cttggcagtttggccattgtattgcgtgacactgtacaagccagggagattttgagatcg
tctttgaccttggcaaagaagctttgtgatgttccttctcaaatctgggtgctgactgtt
ttgacagctttatataaagaattaggagaaagaggaaacgaaatggacaatgctgattat
cagacaaaaaaatctgaagacctgcataagaggctggctgatgcacaagcgtccatttat
catattgaaataattgagagagtaagatttgaagttccacaattacatgagttggaaatc
aagcgtgcaatggcaggcccaagcatgggagttaataatcttgatattccagaatctatt
ggccttccagcacaagcacccgttccatcatcaatgctagttgatatagatggtagtggt
agaagacatggaaaatggagaatttag
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