Medicago truncatula (barrel medic): 11430500
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Entry
11430500 CDS
T01716
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11430500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11430500
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
11430500
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
11430500
NCBI-ProteinID:
XP_003608251
UniProt:
G7JRV7
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All DBs
Position
4:44083377..44088813
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AA seq
588 aa
AA seq
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MNMVECKRKKESQGEKNNNMDSNSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERW
SRRNVFIGNCYAVSPEILTRRFPNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADK
YPFLEELRLKRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCKNLTELDI
QENGVDDKSGNWLSCFPESFTSLEILNFANLSNDVNFDALEKLVARCNSLKTLKVNKSVT
LEQLQRLLVRAPQLCELGTGSFSQELTGQQYSELERAFNNCRSLHTLSGLWVASAQYHQV
LYPVCTNLTFLNFSYAPLDSEGLSKLLVRCPNLRRLWVLDTVEDKGLEAVGSYCPLLEEL
RVFPGDPFEEGAAHGVTESGFIAVSEGCRKLHYVLYFCRQMTNAAVATVVENCPDFTHFR
LCIMTPGQPDYQTGEPMDEAFGAVVKTCTKLQRLAVSGSLTDLTFEYIGKYAKNLETLSV
AFAGSSDWAMQCVLVGCPKLRKLEIRDSPFGNAALLSGFDKYESMRSLWMSDCKVTMNGC
RLLAQERPRLNVEVMQEEGGDDSQAGKLYVYRSVAGPRRDAPPFVLTL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggtagagtgtaagagaaagaaggaatcacaaggtgaaaaaaacaataacatg
gattcaaattcagattttcctgatgaagtgttggaacgtgttcttgggatgatgaaatca
cgcaaagacagaagctcagtttcattggtatgcaaagaatggtacaacgctgaaagatgg
tcaaggaggaatgttttcataggtaactgttatgctgtgtcacctgagatcttgacacgt
agatttccaaacataagaagtgttacaatgaaaggaaaacctcgtttttctgattttaac
ttggttcctgcaaattggggtgctgatattcattcatggttggttgtttttgccgataaa
tatccttttcttgaagagttgaggcttaagagaatggctgttagtgatgaaagtttggag
tttttagctttttcttttcctaatttcaaagctctttctcttttgagttgtgatggattt
agcactgatgggttggctgctgttgctactaattgcaagaacttaactgaacttgacata
caggagaatggcgtcgatgataaaagtggtaattggttgagttgcttcccagaaagcttt
acatcattggaaatattgaactttgccaacctaagcaatgatgtaaacttcgacgcgctc
gagaaacttgtcgctaggtgcaattcattaaagactttgaaggttaacaaaagcgtaaca
ctggaacagttgcaaagacttcttgtccgtgctcctcagctctgtgagcttggtactggc
tcattttcccaagagctgacaggtcagcagtattcagagcttgaacgcgcgttcaacaat
tgtagaagtcttcacaccctttctggtttatgggttgcttcagcacaatatcaccaagtt
ctataccctgtatgcacaaatctgactttcttgaattttagttatgctcctcttgacagt
gaaggcctttctaagcttcttgttcgctgtcctaatcttcgacgcctttgggtattggac
acagttgaagacaagggactggaagctgttggatcatattgtccattgcttgaggagcta
cgtgtttttcctggggatccctttgaggagggcgctgcacacggggttactgaatcaggg
tttattgctgtctctgaaggatgccggaagctacactacgtcctatacttttgccgtcag
atgaccaatgctgctgttgctactgttgtggaaaactgccccgactttactcattttcgg
ctctgcatcatgacccctggtcagccagattaccagacgggtgaacctatggacgaggcc
tttggagcagttgttaagacctgcactaaactccaaaggcttgctgtatcaggttctcta
actgacctgacatttgagtatatagggaagtatgctaaaaacttggaaacactttcagtg
gcttttgctggaagcagtgattgggcaatgcaatgtgtactggttggctgtccgaagctg
cgaaaacttgagataagggacagtccattcggcaatgccgcgcttttgtctggttttgac
aagtatgagtcaatgaggtcactttggatgtcggactgcaaagtgacgatgaatggatgt
agattgttagcacaagaaaggcctaggttgaatgttgaagtgatgcaggaagaaggaggt
gatgatagtcaggctggaaaactttatgtttatcgttctgttgctggaccaagaagggat
gcacctccatttgttctcactctctga
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