Medicago truncatula (barrel medic): 11430528
Help
Entry
11430528 CDS
T01716
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11430528
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Other 90S particles
11430528
Pre-60S particles
Other pre-60S particles
11430528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
11430528
NCBI-ProteinID:
XP_003590714
UniProt:
G7I2M7
LinkDB
All DBs
Position
1:36294711..36304004
Genome browser
AA seq
1288 aa
AA seq
DB search
MEGIEMEQPTFNNESNDDICNSILSRFSKSTAVSHQHLCTVIGAMSQELKDHNLPSTPVA
YFGATCSSLNRIVPEPNPPDHVIDSLVTILSIVIVKVPMAVLKKERESLSELIVKVIHSQ
SSKNSESVVVDALKCASHLLIHRDSVHWSDVSTLFNLLLGFLTDSRPKVRRQSHLGLRDV
LINFQKSSLLASASEGVKNLLERFLLLAGGANANAGEGTKGAQQVLYVLDALKECLPLLS
LKDKNSILKHFKTLLNLRQPLVTRRIMDALNFICLNSTSEVSSEALLEVLSTLSSLSTSS
NEISGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFSDLKDILASEHEEAIFAATDAL
KSMINYCVDESLIKQGVDQITLDESRRSGPTIIEKICATIESLLDYHYAAAWDRVFDVVS
AMFHKLGSDSPYFMRGILKNLEDMQKLPDEDFPFRKQLHTCLGSALVAMGPETFLSFIPL
NLEAEDLSVSNIWLFPILKQYIVGARLKYFAEEILPMIGRIREKAQKLEKQGLTVSSRNA
DALAYSLWSLLPSFCNYPSDTAKSFKDLERHLRSTLKEEPDIRGIICTSLQLLVRQNKNI
KDSNDKDDIGQDMAKEQVLVNYSQQVATENLRALEISAKNLLKDLSDVFLKSTKDDGGCL
QGTVSDIASIAEKKVVQNLFKKKMSDLLKCTQNANRIDGSDSSMQIDASSDVSQSVLRAR
LLDFAVSLLPGLDTKDIDLLFQVLKPALQDVGVMQKKAYKVLSIILRSSDSFVSSKLEVL
LGLMVEILPCHSSAKRHRLDCLYFLILHVMKSEAVKVEFLYFLTVQDSKSKDDSMAWPEV
FLTEIILALKEANKKTRNRAYDILVEIAHAFGDEERGGNRNNLFQFFIKVARGLVGKTPH
MISATVKGLARLAYEFSDLALTAFDLLPSTFVLLEKKNREITKANLGLLKVLVAKSQAEG
LQMHLKSVVECLFQWQDEAKNHFKAKVKLLLGMLISKCGLEAVKAVLPEEHMKLLTNIRK
IKERKERNRGAKSEETRSQVSKATTSRKSRWNHTDIFSEFDGDSKGSDAEYLNGKTISRG
GKSSTHLKSAASSFRSKMRLKNNIPEHLSDESDDEPLDLLDRQKVRSALRSENLKRKSRS
DDDEMEVDSEGRLIIREEGEQTEEKPADSEYDARSEPDSHLSARSGTKAQKRRRTAEPGR
AGRAYTGKEYASKKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQHRAAAKKGMATVVNMTK
RLEGKSASGVLSMKSMKLKRTQKKGSKQ
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatcgaaatggagcaaccaacattcaacaacgaatccaacgatgatatatgc
aattcaatcctctctcgtttctcaaaatccaccgccgttagccaccaacacctctgcacc
gtcatcggcgcaatgtcacaggaactcaaagaccacaacctcccttctaccccagtcgca
tacttcggcgcaacgtgctcctcccttaaccgcatcgttccggaacctaatccacctgac
cacgtcatcgactcgcttgtcacgattctctcgattgttatcgttaaagtgcccatggct
gtgttgaagaaggagagagagtctttgtccgagcttattgtgaaagttattcattctcag
tcgtcgaagaattcggagagtgtcgttgttgatgcattgaagtgtgcttcgcatctgttg
attcatagggatagtgttcattggtctgatgtgtcgactttgttcaatcttttgttagga
tttcttactgattcacgacccaaggtaagaaggcaatcccatctgggcctccgtgatgtc
ttgataaattttcaaaagtcttcgctattagcatctgcaagtgaaggtgtcaaaaaccta
cttgaaaggtttttactgcttgccggtggagcaaatgcaaatgctggtgaaggaactaag
ggagcccaacaggttttgtatgttctcgatgccttgaaagaatgccttcctttgttgtca
ctaaaagacaagaacagcattctcaaacacttcaaaactctattgaatctgcgtcaaccc
ctagtcactaggcgcataatggatgctttgaattttatctgtcttaactcaacatcagaa
gtttcctctgaagcactacttgaggtgttgagcacattatcgtctctttctacctcatca
aatgagatttctggagatggtatgacatttactgctcgcttgcttgatgctggaatgaag
aaagttttttccctgaacaggcaaatgtgtgtaattaagcttcccagtgtcttcagtgat
ctcaaagatattttggcatctgaacatgaagaggccatattcgcagccacagatgcactc
aaaagcatgatcaattattgcgttgatgagagtttgattaaacagggagtggatcagata
actctggatgaatcaaggagatcaggaccaaccattattgagaaaatttgtgcaactatt
gagagcttacttgattatcactatgctgctgcctgggacagagtttttgatgttgtttcc
gcaatgtttcacaaattaggaagtgactctccttactttatgagaggtatactcaaaaac
ttggaagatatgcagaagctgcctgatgaagattttccctttaggaaacagcttcataca
tgccttggatcagctcttgttgcaatgggacctgaaactttcttatcctttataccattg
aatttggaagctgaagatttatctgtctcaaatatatggctttttccaattctaaaacag
tatattgttggtgcacgtctaaaatattttgccgaggaaattttgcctatgattggacgt
attagggagaaggctcaaaagcttgagaagcagggactgacggtgtcatcaaggaatgca
gacgcacttgcttactctttgtggtctttactgccttcattttgtaactatccttcagac
acagctaaaagcttcaaggatctagagagacatttacgtagtacactaaaagaagaacct
gatattcgtggaataatatgcactagtttgcagcttctggttagacaaaacaagaacata
aaggactcaaatgataaagatgatattgggcaagatatggccaaagagcaagtcttggtt
aattactcgcaacaggttgcaacagaaaatttgagggcactggagatttctgccaagaac
ttgttgaaagatctgtcagacgtgttcctgaaatctacaaaagatgacggtggttgtttg
cagggcacagttagtgacattgcttctatagcagaaaagaaagtcgtacaaaacttattt
aagaagaagatgtcagacctcttaaaatgtactcaaaatgccaacagaatagatggttca
gacagctctatgcagattgatgcatcaagtgatgtgtctcaatcagttctcagggcgcgg
cttcttgatttcgcagtttcattgttgcctggattagatacaaaagatattgatttatta
tttcaagtattaaagccagcattgcaggatgttggtgtcatgcagaagaaggcatacaaa
gttctctcgatcatactcaggagctcggatagttttgtttcatcgaagcttgaggttctg
cttgggcttatggttgaaattcttccttgccattcttctgccaaacgccatagacttgat
tgcctttactttttgatactccatgtcatgaagtccgaggcagtcaaagttgagttcctt
tacttcttaacagtccaagactcgaaatccaaggatgattcgatggcctggccagaagtt
ttcctcactgagataatactggctcttaaagaggctaataagaaaaccaggaacagggct
tatgacattctggtcgaaatcgcccatgcatttggagacgaggagagaggtgggaacaga
aataacctctttcaattttttatcaaggttgcgcgcggccttgttggaaaaactccacat
atgataagtgcaaccgtcaaaggtttagctcgcttggcctatgaattctctgaccttgct
ttaactgctttcgatttgcttccatctacttttgtcctgctcgaaaaaaagaatagagag
ataaccaaggccaatcttggtttattaaaggttttagtagccaaatcacaagcagaagga
ttgcaaatgcatctgaagagcgtggttgagtgtttgtttcagtggcaagatgaagccaaa
aatcattttaaagcaaaggtcaaacttcttttgggaatgctcatctcgaagtgtggattg
gaggctgttaaagctgtcctgcctgaagaacatatgaaacttcttaccaacatacgcaag
atcaaggagcggaaagagaggaaccgaggtgctaagtctgaagaaactaggtctcaggtt
tcaaaggcaactacatccaggaaaagtagatggaaccatactgatattttttcggagttt
gatggagacagcaaaggtagtgatgcagaatacctgaacggcaagacaatttctagaggg
ggtaaatcttccacacatctcaaatcagcagcatcttcattcaggtccaagatgagacta
aaaaacaatattcctgagcacttgtctgacgaatcagatgacgagccacttgatttgctt
gatcggcagaaagtaaggtctgctcttagatctgagaatctcaaaaggaagtcaaggtca
gacgatgatgagatggaggtagattctgaaggacgtttgattatccgggaggaaggggaa
cagacggaggaaaaaccagccgattcagaatatgatgctaggagtgagcctgatagtcat
ttgtctgcaaggtccggaactaaagcccaaaagcggagaagaacagcagagcctggtagg
gctggtagggcttacactggaaaggaatatgctagcaaaaaagctggaggagatattaag
aggaaggataagcttgaaccttatgcatattggccacttgatcggaaaatgatgagtcgt
cgaccacaacatcgggctgctgcaaaaaaaggtatggctactgtggtaaatatgacaaaa
aggcttgaaggcaagagtgcgtctggcgtgctttctatgaagagtatgaaactaaaaaga
actcaaaagaaaggcagcaagcaatag
DBGET
integrated database retrieval system
