KEGG   Medicago truncatula (barrel medic): 11430570
Entry
11430570          CDS       T01716                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11430570
Enzymes [BR:mtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     11430570
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    11430570
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5
Other DBs
NCBI-GeneID: 11430570
NCBI-ProteinID: XP_003588560
UniProt: G7I4E3
LinkDB
Position
1:complement(1012192..1027631)
AA seq 2129 aa
MSSPSPRNRLNQFYTTKKRKAISPAPKAGRIEKVARIVADGSPSAKGSLEGYLVPSQEDP
VRPDLVRRKLGLDIGGSLDKQPVSLAQEIRHLDAMRAGIENEVTMVDDSVKEHTLSDLGD
VGEKSELKQFKAELFSLYCGQLPQETRVKGHKKYDSLTLVEESSSIPQKCDDTSVLHFGC
ENISSEKITVDMKSGVAGNTLESIPGCSAKVSDGGATNAFDTGFRKCSNTSTSMNMAECQ
TPGSLIVKACIRGTPKSTRGSSMFSPGEAFWDEAIQLADGLVVPTGNDASKVIEESNVVG
DQVEMKGSCNLQNYDGKARKILDQSKNIGLAEMHTKDSMKEASSLPVKHFDFSNDHNMDE
NILQNCRVDNQVNVTCGSGRKYEPISVVSRTHEQPYEVKKILADELGKRMRKDNSNMTSN
NFSSPNNEARTTLSIHASFEATTPSSNVSLDNHLDLHSWLQPEICSIYRKKGISKLYNWQ
VDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRKVITTGKMAILVLPYVSICTEKAEH
LEKLLEPLGKHVRSYYGNQGGGSLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVID
ELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGEGSGGSSDKNDPAQGLQIVGMSATM
PNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVV
ELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRK
CPAGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARR
VIFRQPRIGCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPQELKKVMGLLNESCPPLH
SCLSEDLNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFLDVVKSAQESLRWLCQ
RKFLEWNEDTKLYSTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTP
INVDVEPDWESYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGVPMGSNKSRWSNNKRQN
QHGMSSGIVNSDDQTLRVCKRFYVALILSLLVQETPVGEVCEAFKVARGMVQGLQENAGR
FASMVAVFCERLGWHDFEGLVAKFQNRVSFGVRAEVVELTTIPYVKGSRARALYKAGLRT
PLAIAEASIPELVKALFESSSWGTEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARIAAF
SAFKSLGYDVPQFAPPISTAVCNSIRKEVGSSSGSDTADTSHSFIDTNHIDNSNVPALEK
EKDLIKSSDNGALVSVEGKSDSVMPHSLSTVPVVVPSINELSMTSGPAKIPDVTTLSVHL
QKQNDKSIMHNGCHAQGTGEQDHRGNLASGNMINSSRKGPINAVSSPGGLDSFLDLWDTV
AEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMYYINLPRDILLSGNRKDDGFSLTAC
SSKQKVSSSNSKQDLMNAMHRWSRISKIIEKKEVRKFTWNLKVQIQVLKKPSVSVQRFGS
LDTIDKNMHLEVVDNSYILLPPIHVKDAIDMCIVAWILWPDEESSSSPNLDKEVKKRLSP
EDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEKLVEALMEIEIPLVN
VLADMELWGIGVDLEGCIQARKLLVKRLKQLEKEAYKLAGMTFSLSMPADIAKVLFEHLK
LPIPDGKNKGKNHPSTGKHCLDALRNEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVS
TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKMNGDKNEGDADESCRVNARDYFV
PTQDNWLLLTADYSQIELRLMAHFSKDSTLIELLRKPDGDVFTMIAARWIGCPEVSVGSR
QREQTKKMVYGILYGMGPNSLAEQMDCTSDEASERISNFKSTFPGVASWLHEAVAFCRSK
GYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNSICQGSAADIIKIAMIKIYSEIFPGVD
KLDSSSSVTAKFEMLRDRCRILLQVHDELVLEVDPSVVKEAALLLQTSMENAVSLLVPLN
VKLKVGRTWGSLEPFAPDKFTGDTPIADS
NT seq 6390 nt   +upstreamnt  +downstreamnt
atgtcctctccttcccctcgcaatcgcctcaatcagttttatactactaagaaaaggaaa
gcgatttctccggctccgaaggcggggagaatagagaaagttgcaaggattgtggctgat
ggatctccaagtgcgaaaggatcattggaaggttacttggttccatcgcaggaggatccg
gtgaggccggatttggttagaaggaaattgggattagacattggtggttctcttgataag
cagcctgtttcattagctcaagagattcggcatttggatgctatgagggcggggattgaa
aatgaagtgaccatggttgatgattctgtgaaggaacacactttaagtgatcttggagat
gttggtgaaaaatcagagcttaaacaatttaaagctgagcttttttcactctattgcggt
caactgccacaagagacgagagtgaaaggccacaagaagtatgattctttgacattagta
gaggaaagtagtagtataccgcagaagtgcgatgacactagtgtgctgcattttggttgt
gaaaacatttcgagcgagaagatcaccgtagacatgaagtctggtgttgctggcaatact
ttggaaagtattccaggctgctctgcaaaggtttctgatggtggtgctactaatgccttt
gacacgggttttagaaaatgtagtaatacttctacgtctatgaatatggctgaatgccaa
acaccgggatctttgattgttaaagcatgtattagggggactccaaagtcaacacgtgga
agctcaatgttttcgcctggagaggccttttgggacgaagcaattcaattagctgatggt
ttggttgttcccacgggtaatgatgcttctaaggttatagaagaaagcaatgtggtggga
gaccaagttgagatgaagggctcatgtaatttacaaaattatgatggcaaggcaaggaag
atattggatcaaagtaaaaacatagggttggctgagatgcacacaaaagattctatgaaa
gaagcatccagccttcctgttaagcattttgatttttcaaatgaccataatatggatgaa
aatatccttcaaaattgtcgtgttgataatcaagtcaatgttacttgtgggtctggaagg
aagtatgaacctatttctgtggtaagtcgtacacatgaacagccgtatgaagtgaagaag
attttagctgatgaattaggcaaaagaatgagaaaggataattccaatatgacatctaat
aattttagttcacccaacaacgaggccaggacaacactcagtatacatgcatcttttgaa
gccacaactccttcaagtaatgtgtcacttgataatcatttagacctacatagttggctt
caacctgaaatatgcagcatatatagaaagaaaggcatttcaaagctttacaattggcag
gttgactgccttcgtgtggatggtgttctacaaagaagaaatcttgtgtattgtgcttcc
acaagtgctggaaagagttttgttgctgagattttaatgttgcggaaggtgataacaact
gggaaaatggcaatactcgttcttccatatgtatccatttgtacagaaaaggcagaacat
cttgaaaagcttcttgagccacttggtaaacacgttcgcagttattatgggaaccaaggt
ggtggatcacttcctaaagatacttctgtagctgtatgcacaatagagaaggcaaattca
ctaatcaatagattattggaagagggccgtctctcagaaatgggaatcattgtgatagat
gaactgcacatggttggtgatccaaaaagaggttatcttctagagcttatgttgacaaag
cttcgctatgcagcaggggagggcatttcaaaatctagtgacggagagggttctggtgga
agcagtgataagaatgatcctgctcaaggtctccaaattgttggaatgagtgcgacaatg
cctaacgtggcagcagttgctgactggcttcaagcagcactataccagacagagttccga
ccagttcctttagaagaatatattaaagttggcaattccatttataacaagagtatggaa
ctttctaggacaatcccaaaaggagctgaccttggtggcaaggatccagaccacgttgtt
gaactatgtaacgaggttgttcaagagggacaatcagtgttaatattttgctctagccgt
aagggttgtgaatcaactgcaagacatgttgcaaagttccttaaaagctttactgttgat
attaatgagaataattgtgagtttgctgatattacttctgctattaactccctgagaaag
tgccctgctgggttggaccccgtacttgaagaaacttttccagctggtgttgcatttcac
catgctggccttacggttgaggaacgagagattgttgaaacttgttatcgaaaaggcctt
ttacgtgtcttaactgccacatccaccttagcagctggagttaatctaccagctaggagg
gtaattttccgccaacctagaattggttgtgattttattgatgggacgaggtacatgcag
atggcgggtcgtgctggtcgaactggaatcgatacaaaaggagaaagtgtactcatctgc
aaaccacaagagttaaaaaaagttatgggacttctgaatgaaagttgtccaccgttacat
tcgtgtttatcagaagatttaaatgggatgactcatgcaatcttagaagtggttgctgga
ggaatagttcaaacggccaatgacattcaccggtatgtaagatgtactcttttgaactcc
acaaaaccatttctggacgtggtaaaatctgctcaagaatctctaagatggttgtgccaa
agaaaatttcttgaatggaatgaagacactaaactctacagcaccacacctcttggacgt
gcatcttttggcagttctctctgtccggaagaatcacttattgtgttggctgatctttca
agggcaagggaaggatttgtccttgcatctgacctgcatttggtttacttggtgacacca
attaatgttgatgttgagccagattgggaatcgtactatgagcgttttgtgaaattgtct
cctcttgatcagtcggttggaaatcgagtaggtgttacagaaccgtttttgatgcgtatg
gcacatggtgtaccaatgggttcaaacaagtcaagatggtcgaacaataaaagacaaaat
caacatgggatgtccagtggaatagttaactcggatgatcaaacacttcgtgtctgtaaa
cgattctatgttgctctcattttatcgcttttagtgcaggaaactcctgtgggtgaggtt
tgtgaagcatttaaagttgccagaggaatggttcaaggtttgcaagaaaatgctggtcgg
tttgcatctatggttgctgtgttctgtgaaaggctggggtggcatgattttgaaggctta
gtcgctaagtttcaaaatcgtgtatcatttggagttagagcagaagttgttgagcttacc
accattccctatgttaaaggctctcgagcaagagcactctataaagcaggtttacgcaca
cctcttgcaattgctgaagcatccattcctgaactagtaaaagcactttttgaatcttca
tcatggggtacagaaggttctgcacaaaggagcttacaattcggtgtagcaaagaagata
aagaatggtgctcgcaagattgttttggataaagctgaagaagcaaggattgctgctttc
tcagcctttaagtcactcggatatgatgtcccacaattcgctccgcccatatccactgct
gtatgcaattctatcaggaaagaagttggaagttcctccggaagtgacacagctgacact
agtcatagctttattgatacaaatcacattgataactctaatgtacctgctttagaaaaa
gaaaaggacttgattaaatcatccgacaatggtgctctagtttctgtagaaggaaaatca
gacagcgtgatgccacatagtttatctactgttccagttgtagtaccttcaataaatgag
ctcagtatgacttctggtcctgccaaaattcctgatgttaccaccctctctgttcattta
cagaaacaaaacgataagtccattatgcataatggttgccatgctcaaggtacaggggaa
caagatcatagggggaatttggctagtggtaacatgattaactccagccgtaaaggtccc
attaatgcagtcagtagtcctggcgggcttgattcatttttggatttatgggatacagta
gcagagttctactttgacattcattacatcaaacgattggaattgcactctgctgcccct
tttgaagtacatgggattgccatctgttgggaaaactctcccatgtactacattaatctt
cccagggatattctgttgtctggaaatagaaaagacgacggtttttctttgactgcatgc
agttctaagcagaaagtttcatcatctaattctaagcaagatttgatgaatgccatgcac
agatggagcaggattagcaaaataatagagaaaaaggaagtgagaaagttcacctggaat
ttgaaggttcagattcaggtgctaaaaaaaccatcagtttccgttcagaggtttggttcg
ttggacacaattgataaaaatatgcaccttgaagttgtagacaattcctacatattattg
cccccaatccatgttaaagatgcaattgatatgtgcattgtggcttggattctgtggcct
gatgaagagagtagctctagtccaaacctagataaggaggtaaagaaaaggttatcccct
gaggatgcagcagcagctaatcagtgtggccggtggaggaatcagatgcgaaaagctgct
cataatggttgctgccgtcgagttgctcaaacacgagcattatgttctgttctttggaaa
ttgcttgtttctgagaaacttgtagaagcgcttatggaaatagaaatcccattggtgaat
gttcttgctgacatggagctttggggaattggtgttgatttggagggatgtatccaggct
cgaaaattgttggtgaaaaggctgaagcaacttgaaaaggaagcttacaaactggctgga
atgacgttttcattgagtatgccagcagatattgcaaaggtgctgtttgaacacttgaag
ctgcccatacctgatgggaaaaataagggaaaaaaccatccaagtaccggcaaacactgt
ttggatgcactgaggaatgaacatcccattgttccaatcatcaaagagcaccgaacattg
gcaaagctcttgaactctacactaggatcaatttgttctctggctaggctatctgtaagc
acacagaagtacacattgcatggtcattggctccagacttccacagcaactggacgactt
tcaatggaggaacctaatcttcagtgtgttgagcatgcagttgacttcaaaatgaatggt
gacaaaaatgaaggcgatgctgatgagagttgcagagtcaatgcccgtgactactttgtt
cctactcaggataattggttactgttaacagcagattattctcagatagaattgaggttg
atggcacatttttctaaagattctacacttattgaacttcttcgtaagcctgatggagat
gtcttcacaatgatagcagcaagatggattggatgtcctgaggtttctgtgggttctcgg
cagagagagcagaccaaaaagatggtgtacggaattctttacggtatgggtccaaatagt
cttgcagaacaaatggattgcacttccgatgaagcttctgaaaggattagtaacttcaaa
agtacttttcctggtgttgcttcttggcttcatgaagctgttgcattttgtaggagtaaa
ggatatgtagagactctcaagggaaggaaacgatttttgtcaaaaataaaatttggcagt
agtacagaaaaatcaaaagctcagaggcaagctgtcaattccatttgtcagggatctgct
gccgacataattaaaattgcaatgattaaaatttactctgaaatttttcctggagttgat
aagctggattcgagttcttcagtcacagccaagttcgaaatgcttagagatcgttgccgg
attttgttacaggtacacgatgaattagtgctggaagttgatccctctgtggtgaaagaa
gctgcactactgttgcagaccagcatggagaatgcagtctcacttcttgttcctcttaat
gtcaaattaaaggttggaagaacatggggatctttggagccatttgcacctgataaattc
acaggcgacactcccatagctgattcctga

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