Medicago truncatula (barrel medic): 11430997
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Entry
11430997 CDS
T01716
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11430997
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
11430997
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11430997
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
11430997
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11430997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
11430997
NCBI-ProteinID:
XP_003612260
UniProt:
G7JYS1
LinkDB
All DBs
Position
5:9184855..9187822
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AA seq
303 aa
AA seq
DB search
MDDSPVRRLSRSPSPWRAQSRSRSRSRSQSGSLDRHRPRSLSRSPEMQRPRSRSRSPEMQ
RPRSLSRSPEMQRPRSRSRSLEKQRPPSQSMSREMQRPRSRSRSLERQRPRSPSRNRGRS
RSRSPDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD
TAEDANRCIKYLNQSILEGRYITVERSKRKRPRTPTPGHYLGLKNTRDYGPRGGDRGRHQ
GGFGRDDYPYHRSPRRSPYRGSRDYSPRHSPYGGSGRYRRDRSRSPPYAPYGSPDRRYAR
GPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctccagtaagaaggctttcaaggtccccttccccatggagggctcagtca
agatccaggtctcggtccaggtctcagtcaggatcccttgacaggcacaggcccaggtct
ctgtcaaggtcgcctgaaatgcaaaggcctaggtcgaggtcgaggtctcctgaaatgcaa
aggcctaggtctctgtcaaggtctcctgaaatgcaaaggcctaggtcacggtcaagatcc
cttgaaaagcaaaggcctccgtctcagtcaatgtctcgtgaaatgcaaaggcctaggtct
cggtccagatctcttgagaggcaaaggcctagatccccctcgagaaatcgtggcagatca
agatcaagaagtcctgataggaatggtggggacactctttatgtgactggtctctcttca
agggtcactgagagagacctagaggagcatttctctaaggaagggaaggttgcttcatgt
tttcttgtggtggagccccgtacgcgtatatctcgaggttttgcttttgtcactatggat
actgctgaggatgcaaaccgctgtatcaagtacctcaatcaatccattttagagggccgc
tatatcactgttgagcggtcaaagagaaagcggccaagaactcccacacctgggcactat
cttgggctgaaaaatactagagactatggacctcgtggtggtgaccgtggaaggcatcag
ggtggatttggtcgtgatgattatccatatcataggtctccaaggcgttctccgtatcgt
ggtagcagggattattccccaagacactctccttatggtggaagtggaaggtataggagg
gataggtctaggtcacctccttatgctccatatggtagcccagataggaggtatgctcgt
gggcctaggtga
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