Medicago truncatula (barrel medic): 11431041
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Entry
11431041 CDS
T01716
Name
(RefSeq) TBC1 domain family member 5 homolog A isoform X1
KO
K18469
TBC1 domain family member 5
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11431041
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
11431041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF6277
Motif
Other DBs
NCBI-GeneID:
11431041
NCBI-ProteinID:
XP_003610057
UniProt:
G7JUA9
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All DBs
Position
4:complement(61046930..61052276)
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AA seq
836 aa
AA seq
DB search
MPPALLDPPLSKTSSVSSLISGTISQEPVPENRLFDDLRGLQWRINLGVLPSSSSSTSVD
DLRRATANSRRRYASLRGRLLVDPHVPKDESSSPNLVMDNPLSQNPNSTWGRFFHNAELE
RMVDQDLSRLYPEHGNYFQTKGCQGILRRILLLWCLRHPDCGYRQGMHELLAPLLYVLQV
DVERLAEVRKLYEDHFTDRFDGLFCQENDLSYSFDFKKSSDLTDDEIGSHGKGMKIKSLD
ELDPKIQTIVLLSDAYGVEGELGIVLSEKFIEHDAYCMFEALMNGAHGSVAMADFFSYSP
VAGSHTGLPPVIEASAALYHLLSHVDSSLYSHLVDLGVEPQYFALRWLRVLFGREFSLDN
LLIVWDEIFLSDNSKMEKHAEDNTDTCFRIFHSSRGAFISAIAVAMLLHIRSSLLATENP
TTCLQRLLSFPENTNIKKLIEKAKSLQTLALSTEISSSTPALVEYNNKGKSVITRSVTTI
ACESGSPKTPKSLLPDNSYWEEKWRVVHSAEELKQDGVEKQVPSQKKRWTEKVKLSLKRT
VSEPSSSTIKNGKKESKTSVKRSLLEDLSKELGSEEDIENLGCHETLCQQDNHSLAVEAE
QQDDDSDVSNNYGADDRCLSRNTGSEENSFNLASPPNEFKDHENVSQKSSVGSNLSLDVI
NEISYSSPIDSPLPISDHPENNLSPVAGRNNDSTGNSATLSRNIKLNKFQWLWKFGRNNG
ELMSEKRGLASEAVKQTNKYNDQSNTASSSTAGDLCSSVNFNGDSADQNVMGTLKNIGQS
MLEHIQVIEYAFQQECGQGTSLDNNTSKNVLVGKGQVTAMSALKELRKISNLLSEM
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggctctgttggatccaccattgtcaaaaacatcgtcggtttcatctttaatc
tccggcaccatttctcaggaaccggtgccggagaatcggttattcgatgatcttagaggt
ttgcagtggcgtataaatcttggggttttgccatcttcttcatcttcaacttccgttgat
gatcttcgtcgtgccactgctaattctcgaagaaggtatgctagtttgagagggcggctc
ctggttgatccccacgttccaaaggatgaaagtagttcacccaatcttgtcatggacaac
ccgctttcacaaaatccaaatagtacatggggtcgcttttttcacaatgcagagctggag
aggatggtggatcaggatttatcacgtttatacccagaacatggcaactatttccagact
aaagggtgccaaggcatattgagacggattttattattatggtgtcttagacatcccgat
tgtggttatagacaaggtatgcacgagttgcttgctcctttgctttatgttctccaagtt
gatgtggagcgccttgcagaagttcgaaaactttatgaagatcattttacagacagattt
gatggtctcttttgtcaagagaatgatctttcttacagctttgattttaaaaaatcttca
gacttgacggatgacgaaatcggttctcacggaaaaggaatgaaaatcaagagtcttgat
gagcttgatcctaagatacagaccattgtattgctaagtgacgcttatggggttgaaggt
gaactgggcattgttttatctgagaaatttattgagcatgatgcttactgtatgtttgaa
gctttaatgaatggggctcacggttcagttgcaatggctgattttttctcttattctcct
gttgctgggtcccatactggtttgccacctgtaattgaagcttctgctgcattgtatcat
ttattgtcgcatgtggattcatctttgtatagccatcttgttgatctcggggttgaacca
cagtactttgctctccgctggttgagagttttatttggacgagaattttcacttgacaac
ctcttgatcgtctgggatgaaatatttttatcagataatagtaaaatggaaaagcatgca
gaggacaacacagacacttgttttaggatctttcattcatctcgcggagcatttatctca
gctattgctgtggcaatgttacttcatataagatcttcactacttgcaactgaaaatcct
acgacatgtctccagagattattaagcttccctgagaacacaaacattaaaaaactaata
gagaaagctaaatccttgcagactcttgcattaagtactgaaatttcatcctcgacacct
gcacttgtagaatataacaacaagggtaaatcagttattacaagatctgttaccaccatt
gcatgtgaatcaggttcaccaaaaactcctaagagtttattacctgataatagctactgg
gaagaaaagtggagagttgtccacagtgctgaagaacttaaacaagatggagtagaaaag
caggttccatctcagaaaaagagatggacagaaaaggtaaagttaagtttaaaaagaaca
gtatctgaaccatcttcgtcaacaatcaagaatggtaaaaaggaatctaagacatctgtt
aagcgcagtttgttagaagatctatccaaggaacttgggtcagaagaagatatagaaaat
ctcggctgtcatgaaaccttatgccagcaggataatcattctttagcagttgaggcggag
caacaagatgatgactctgacgtaagcaacaattacggtgctgatgatagatgtcttagc
agaaacaccggcagcgaggaaaactcattcaacctagctagtcctcctaatgagttcaaa
gatcatgaaaatgtctcacagaaaagtagtgttgggtctaatttatcccttgatgtaatt
aatgaaatttcatatagcagtcccatcgattcacctcttccaatttctgatcatcctgag
aacaacctatctccggtggcagggcgcaataatgattccacaggaaattccgccacactt
tctaggaatataaaactgaataaattccaatggctttggaagtttggccgtaataatggt
gagttgatgtctgagaaaagaggacttgcttctgaggctgtaaaacaaaccaacaagtat
aacgatcaaagtaatacagcttcctcttctacagctggtgatctttgcagttctgttaat
tttaatggagattctgctgaccagaatgtcatgggaactttaaagaatattgggcagtcc
atgcttgagcatattcaggtgattgagtatgctttccaacaagagtgtggtcagggaact
tcattggataataatacgtctaaaaatgttctggttggcaaagggcaggttactgccatg
tcagctctcaaggagcttcgcaaaattagcaaccttttgtctgagatgtga
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