Medicago truncatula (barrel medic): 11431230
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Entry
11431230 CDS
T01716
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11431230
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
11431230
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
11431230
Prokaryotic type
11431230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-GeneID:
11431230
NCBI-ProteinID:
XP_003616828
UniProt:
G7K7F6
LinkDB
All DBs
Position
5:37742866..37746900
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AA seq
357 aa
AA seq
DB search
MAILPLRHFTTQMQIPLTNPTFKPPQIFPFHHTIPSPKQQLSFPTNSLKGSGYLSEISKA
IDYEEQYRVAKSQVQRKGLDLEGYSIEGVSIGGHETCIIIPEFKCAFDIGRCPTRAIHQN
FVFITHAHLDHIGGLPMYIGSRGLYNLKPPTVFVPPCIKDDVQKLLDVHKTLGQVELNCE
LVALDVGETYEIRNDLVVRPFRTQHVIPSQGYIVYSIRKKLRKQYSHLNGKQIEKLKKSG
VEITDTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSTTVEHARQHGHTH
ISELIENAQWIRNKTVLLTHFSSRYNIEDIRQAASELQSKTSAKVVPLTEGFKSQYT
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcaattctcccccttcgccatttcaccacacaaatgcaaattcctctcacaaacccc
accttcaaacccccacaaattttcccatttcaccacacaattccctctccaaaacaacaa
ctttccttcccaaccaattcccttaaagggtcaggttatttatccgaaataagcaaagca
atcgattacgaagaacagtaccgagttgcgaaatcacaggttcaacgtaaaggtttggac
ttggaaggatattcaattgaaggagtttcaattggtggacatgagacttgtattattatt
cctgagtttaaatgtgcttttgatattggaagatgtcccactagagctattcatcagaat
tttgtttttatcactcatgctcatcttgatcacattggagggctgccaatgtatatagga
agtcgtggtttatataatttgaagcctcccacagtatttgtacctccatgcatcaaagac
gatgttcagaaattgcttgacgttcacaagacattgggccaagttgaactgaattgtgaa
ttggttgctttggatgtcggggagacatatgaaatacggaatgaccttgttgttcgacca
ttcagaacacaacatgttataccaagccagggttatatagtctactcaatcaggaaaaag
ctgaggaaacaatacagtcacctgaacgggaaacaaattgagaaactaaaaaagtcaggt
gttgagattacagacactatattatctcctgaggtagccttcactggggatacaacatca
gattttatgcttgacccacttaatgccgatgcattgagagcaaaagttcttataaccgag
gcaactttcctagatgattcaaccacagtagagcatgcacgccaacatggtcatacccat
atatctgagctcattgaaaatgctcagtggattcgcaacaaaacagttctgttgactcat
ttttcatcgagatacaatatagaggatattcgtcaagctgcatcagaattgcagtccaag
acttcagcaaaagtggttccacttacagaaggcttcaaatcacagtacacatag
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