Medicago truncatula (barrel medic): 11431564
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Entry
11431564 CDS
T01716
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11431564
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
11431564
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
FHIPEP
Motif
Other DBs
NCBI-GeneID:
11431564
NCBI-ProteinID:
XP_003597886
UniProt:
G7IUV8
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Position
2:complement(50885716..50889386)
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AA seq
404 aa
AA seq
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MFHTMEYFFTLLMILSMFKLGLSITTTFNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSG
TSRLIIPAAKTFLLRPIAFRGPCKSNYIYIELSGNIIAPKTKSEYSGSPINTWIGFSFVN
GLIISGKGTVDGRGSMWWKQPCIGNPPPGTSCRPPTAITLNRCYRFQIKGYTSINPARSH
ITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGDDCIAISAGSSVIK
ITAITCGPGHGISIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKTKQGGGGFARRITF
ENIKFVRAHNPIWIDQFYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNV
GCSNLVFDRVYVRSAVPKMKVFSFCHNAHGRASHTKPILNCLLK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatacaatggagtattttttcacattgttaatgattctaagtatgtttaaactt
ggattgagtatcacaacaactttcaatgtattgcaatatggagcagttggagatggaaaa
accaatgattctcctgcttttctgaaagcatggaaagatgtgtgtaatagcaaatcaggc
acatctcgtctcatcataccagcagccaagacattcttactgaggccaatagcattccgt
ggtccatgcaaatctaattatatttacattgagctttcagggaacattattgcacctaaa
acaaaatcggaatattcaggatcccctataaacacatggattggtttctcatttgtgaat
ggtttaattataagtggaaaagggactgttgatggtcgaggctctatgtggtggaaacaa
ccttgcataggaaatccaccacccgggacaagttgccgtccaccaacagcaataacattg
aatagatgctatcgatttcaaataaaaggatatacaagtattaatccagcaagaagccat
ataactctaacaagctgcaaaaagggaattatctctaatatccgtttaattgctcctgga
gagagccctaatactgatggcattgatatttctgcctcaagagacattcaagtacttaat
tctttcattgcaacaggtgatgattgcattgctattagtgctggatcatcagtaatcaaa
ataactgctataacatgtggtccaggacatggtatcagcattggatcattgggggcacgt
ggagacaccgatattgtagaggatgtgcatgtgaaaaattgtacgttgactgaaacgtta
actggagtaaggatcaagacaaagcagggtggaggtggatttgctaggaggattaccttt
gaaaatattaaatttgttcgagcccataaccccatttggattgaccaattttattgtgtt
aatcaaatggtttgcagaaacatgactaaagcaatcaaagtgagtgatgtaacatataga
gggattagtggaacatcattaacagacaaggcaataaatttgaactgcgaccaaaatgtg
gggtgctccaaccttgtatttgatcgtgtttatgtaagatctgctgttcctaagatgaag
gttttctccttctgccataatgctcatggaagagcctcacacaccaaaccaattctaaac
tgcttgctcaagtag
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