Medicago truncatula (barrel medic): 11431832
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Entry
11431832 CDS
T01716
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11431832
04121 Ubiquitin system [BR:
mtr04121
]
11431832
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11431832
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
11431832
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11431832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
Zn_ribbon_GTF2H2
FAR1_N
zf-RING_16
zf-Nse
Motif
Other DBs
NCBI-GeneID:
11431832
NCBI-ProteinID:
XP_024640066
LinkDB
All DBs
Position
5:39692954..39697996
Genome browser
AA seq
325 aa
AA seq
DB search
MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD
LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVPEQGWGVYSS
GPFLVFHGQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPAARSS
IDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVC
RVELPPQGQMSSRGSSRSNSGGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSNNNQYSE
TGGSSSSTNADQNNGTRYNGWHYDN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacacactggtgttatgaatgcaatcggccaattgtgcttgaaggg
agagacgtcgtttgcccttactgtgatgagggatttgtacaagaacttaacgagatgcga
ggcactgcacctcaaaatacctttccatcacgctcgggagagtttaatcaaatgcctgac
ttatttgatgctatacatgcttttgtgggacacagaggttctgacaataggtttgggctt
atggatgctgttgataatttcatgaggcatagaatggctggaatgcacccaaactttgat
gttagagggaggtctagttctgtcccagttcctgaacagggctggggcgtttatagttct
ggtccttttttagtatttcacggtcaagttcctggactaaccttgcctaatggaagcccg
agaggtggtcctaggcgtggcgattttggtgactattttatgggttctggactggaagaa
cttattgaacaactaaccatgaatgatcggcgtggtccacccccagctgcacgatcttca
attgatgccatgcctactattaggatcacacaggcgcatcttcgctccgattcacattgt
ccagtttgcaaagaaaaatttgaacttggttctgaagccagagagatgccatgtgaccat
atttaccattctgaatgcattgttccttggttggttcaacataactcatgtcctgtttgc
cgtgttgagctaccaccccaaggacagatgagttctcgtggtagtagtcgaagcaacagt
ggtggaaatggtagctcaaggggcagggagagtgaccgtccaaacaatggaaggagaaat
ccgttttcgtttctgtggccgttccgttcttctagttcaaacaataatcaatattctgag
actggaggtagcagctcttcaaccaatgctgaccagaataatggaacacgttataatgga
tggcattatgataactaa
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integrated database retrieval system
