Medicago truncatula (barrel medic): 11432243
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Entry
11432243 CDS
T01716
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11432243
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
11432243
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11432243
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11432243
03041 Spliceosome [BR:
mtr03041
]
11432243
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
11432243
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
11432243
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
11432243
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
11432243
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11432243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
11432243
NCBI-ProteinID:
XP_003626230
UniProt:
G7KXK9
LinkDB
All DBs
Position
7:complement(53478400..53481413)
Genome browser
AA seq
317 aa
AA seq
DB search
MEGEMDKTVVDDVIRRLLEGKGGKQVQLSESEIRQLCINARQIFLSQPILLDLRAPIRIC
GDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDRVYLLR
GNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQN
LDQIREVTRPTEIPDSGLLCDLLWSDPDPKAEGWADSDRGVSCTFGSDVVAEFLDKNDLD
LICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPADKE
FGSSSSKMNLKKPPALG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaaatggacaaaacagtggtagatgatgtgataagaagattgttagaagga
aagggaggaaaacaagtacaactttctgaatctgagattcgtcaactttgcatcaatgca
agacaaatcttcctctctcaacctattcttcttgatcttcgtgctcccatccgcatttgc
ggtgatattcatggtcaataccaagacttattgagactttttgaatatggtggctaccct
ccagctgcaaattacttgtttcttggtgattatgtagacagagggaagcaaagtttggag
actatatgcttgcttttggcctacaaaataagatatccggacagagtttatctcttaaga
ggaaaccatgaagatgcaaagataaaccgaatatatggtttttacgatgaatgtaaaagg
aggttcaatgttaggctatggaagatattcactgattgctttaactgtttgccggtagct
gcactcattgatgagaaaatactttgtatgcatggaggactttctcctgaattacaaaat
ttagatcagataagagaggttacgaggcctaccgaaattccagacagcggtctcttgtgt
gatctgctttggtctgatcctgatcctaaagctgagggttgggcagatagcgaccgaggt
gtttcgtgtacttttggatctgatgttgtcgcggagtttttggataaaaatgatcttgat
cttatttgcaggggtcatcaggttgtggaggatggatatgagtttttcgctaaaagaaga
ttagttacaatattctctgccccaaattatggtggggaatttgacaacgccggtgcgtta
ttgagcgttgatgaatctcttgtatgttcgtttgagatactgaaacctgctgataaagaa
tttggaagtagttcatcaaaaatgaatttgaagaagccccctgcactgggatag
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