Medicago truncatula (barrel medic): 11432385
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Entry
11432385 CDS
T01716
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
11432385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11432385
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
11432385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
11432385
NCBI-ProteinID:
XP_003626618
UniProt:
G7L558
LinkDB
All DBs
Position
7:55942298..55951409
Genome browser
AA seq
754 aa
AA seq
DB search
MDAAAYSSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTA
VQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSG
AKYGKPLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTILKEAPCS
SVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDDGKHT
QKNDGICRTSKLENCSPKSVQSEKTDGLTSALTIDEMQSNQNYPRHITVHVVDGNFGTST
QSPSQNMLIQDSTFQPIGGINVQPNLFANPAASNTSENQNNMARSSSHQSFPPCPPFAHN
HADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFPS
RQIGSPPSVTAIAAATVAAATAWWAAHGLLPVCAPLQTAFACPPASTTVAPSTNISKEPP
KTDQGDITLHNPPLQDQLLDPENSEALQAQHSGSKSPAVSSSESEESGDAKLNTSSKATI
NLDINQPISENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEECKIPDADHL
ATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKDNQMDNMK
DNEQKTDHKDHLESKKCICNCDQAQQNLPFVQNNNEEGFLTMGLGQGKLKTRRTGFKPYK
RCLVEAKENRGGTACNQVEETGPKRIRLEGGTSI
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcagcatactcctctggagaagacgtcgttctcaagacaagaaagccatat
acaatcacaaaacaaagagaacgatggactgaagacgaacataatcgatttctagaagcc
ctcaagctatatggccgagcatggcagcgtatagaagaacatataggaacaaagactgct
gtgcaaatcaggagccatgcgcaaaaattcttttcaaagttggagaaggaagcacttgta
aaaggtgctgcattaggacaagctcttgacatagacatcccccctccacggcccaaaaga
aaaccaagcaatccttatcctcgcaagaccaatgttggtaccccaacattacatagtgga
gctaagtatggaaagccacttattgcaattgcatcttcacatggtaaacaagcaatggat
tttgagaaagaatcacttctagaggagcataaagatgaggaaaggccaacaacggtaaaa
gaaaataacgatgaaaattgtttaaaagtattaacaatcctcaaggaggcaccttgttca
tctgtatcttcggcaatcaagagttcaatctcaatgtcagtgccacagacaaattcctgc
accataagggggtttacaccttcagtgaaagaggtaataacacgagatgaaacaaatgaa
tcttttcctactactgagattgaaaaccagatgttgaagatagatgatggcaaacacaca
caaaagaacgatggtatttgtcgaacctctaagttggagaattgttctcctaaatcggtt
caatccgagaaaacagatggtcttacttctgcattaacaattgatgagatgcaaagtaat
cagaattacccaagacatatcactgtgcacgttgttgatgggaactttggaactagtact
caaagtccatcacaaaatatgttgattcaagactccacatttcagccaataggagggatt
aatgtgcagcctaatctcttcgcaaatccagctgcatcaaacacaagtgaaaatcaaaat
aacatggcacgatcctctagtcatcaatcatttcctccttgtcctccatttgcacataac
catgctgattaccaatcctttctcaacatgtcttctacattttcaagtcttattgtctct
accttgctgcaacaccctgcagctcatgctgcagcaagttttgctgctacattttggccg
tatgcaaatgtagaatcttcagctgattctcctgcttgctctcaaggaggtttcccatct
agacaaattggttcacctcctagtgtaacagctattgcagctgctacagtagctgctgca
actgcatggtgggcagctcatggactgcttcctgtgtgcgctccactccagacagctttt
gcctgtcctcctgcatcaacaactgtagctccatcaacaaatattagtaaagaaccacct
aagacagatcaaggagatattacactacataatcctcctctgcaagatcagttactagat
ccagaaaactcagaagctttgcaagctcaacattcaggttctaagtcaccagctgtttct
tcatctgaatcagaggagagtggagatgccaagttaaatacttcatcaaaggccactatt
aatcttgatataaaccaaccaatttctgagaaccctgattccaacaaaatggagggcaga
aaactgatagaccggtcttcttgtggttccaacacaacctctagctgtgaagagactgat
gcgctagagaaggatgagaaagaaaaggaagaatgtaaaatacctgatgcggaccattta
gctaccgatcctagtagtcgtcgatatagaagcattagcaaccttcttgattcttggaag
gaggtgtctgaagagggacgacttgcctttcgggctctattctccagagaggtgttgccc
caaagcttttcacctcctcatgatttgataaataaggataatcagatggacaacatgaag
gataacgagcaaaaaacagaccacaaagatcaccttgagagcaagaaatgcatttgtaat
tgtgaccaggcacagcaaaacctaccatttgtacaaaataacaatgaggagggatttcta
accatgggtcttggacaaggtaaacttaagactcgtcgaacagggttcaaaccttacaaa
agatgtttagtagaggccaaggaaaacaggggcggaacggcttgcaaccaagttgaagag
acgggtcccaagaggatacgcctggaaggggggacttctatttga
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