KEGG   Medicago truncatula (barrel medic): 11432526
Entry
11432526          CDS       T01716                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    11432526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11432526
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     11432526
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor KDM3B_Tudor DUF2457
Other DBs
NCBI-GeneID: 11432526
NCBI-ProteinID: XP_003625965
UniProt: G7KST2
LinkDB
Position
7:complement(51767009..51775456)
AA seq 1280 aa
MSRRNSNGRSPLVNPQRQITSFFTKSTSPLSPSLSKTLKSNPNNPISKSNPNPSPTLTTP
SPLNPNKPHKPRLVIDAPPTISPPPSDSPFIGKRIRVYWPLDEAWYEGTVKSFDTVTSKH
RIRYDDDEEESIDLSKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIEVEECPKEEKQEEED
DDDDNDDSEDEDWGKNAVLENVVDDNDDEDMELEEENEVVESAKGKNSNKVEPKKRKLGG
GAKMEPMKKSKSGNEVNRVAVKLSPLAPLNNLEVRKTSDGADNVATGDSSERFALREAQK
FHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMG
KFYELFEMDAHVGAKELELQYMRGEQPHCGFPEKNFTVNVERLARKGYRVLVVEQTETPE
QMELRRKESGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYLMALTEYCENNPNEMSE
RTYGVCVVDVATSRVILGQFNDDSECSALCSILSEIRPVEIVKPAKLLSAETERALLKHT
RNPLVNELIPNVEFWDADKTLDHLKRIYGHNNDVSAQDGGLDCLPDVLVELVKTDHDSRS
ALSALGGALYYLKQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVALENLEIFENS
RNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLYHVESIKERQEAVAGLKGVNLPHTLEF
RKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACL
SLGVILNNVKSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYD
SAGKAVNEIESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSS
KKGFVRYWTPDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDV
LINLAIASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIG
GPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPSESFELSPVDRIFVRMGARDN
IMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRSVQCR
GLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNEGLDEVTFLYRLSAGACPKSYGVNVAR
LAGLPTSVLQKADAKSREFEATYGKYRTEPNSSNQSWVDEIIVLVQKLNNAANNLSCEEM
VSDHSIVKLQREARELLERC
NT seq 3843 nt   +upstreamnt  +downstreamnt
atgtcgcgtcgtaatagcaatggtagatcacccctcgtcaatccacagcgtcaaatcact
tctttcttcaccaaatccacttctcccctttcaccttctctctccaaaaccctaaaatca
aaccctaataaccccatttctaaatctaatcctaaccctagtcctaccctaactacacct
tcacctctcaatcccaataaaccacacaaaccccgtctcgtcatcgacgctcctcctaca
atatcacctcccccttcggattctccattcattggtaaacgaatcagggtttattggcct
ttagacgaagcctggtacgaaggtactgtcaaatctttcgataccgttacttccaaacat
cgaattcgttacgatgatgatgaagaggaaagtattgatctttctaaggagaagattgag
tggattcaggattcttcctcgaagaagcttaaacgcttgcggcgtggttcttctcctatt
aggaagatggtgattgaggtggaagaatgtcccaaagaggaaaaacaagaagaagaagat
gatgatgatgataatgatgattcggaagatgaagattggggaaaaaatgctgtattggag
aatgttgtggatgataatgatgatgaagatatggaactggaggaagaaaatgaagttgta
gagagtgctaaaggaaagaatagtaataaggttgagccgaaaaagcggaaactaggcgga
ggagcaaaaatggagccgatgaaaaagagcaagagtggaaatgaagttaacagggtagct
gttaagctctcaccattggcgcctttgaataatttggaggttagaaagacatctgatggc
gcagacaatgttgcaactggtgattcctctgaaagatttgcgctccgcgaagctcagaag
tttcactttctaggaaaagatcgcagggatgccaaacgaaggcgtccaggagatgaaaat
tatgactcaagaactctctacttgcctccagattttgtgaggaatttgtcaggtggccag
aaacaatggtgggaattcaagtcaaaacacatggacaaagttttgtttttcaagatgggt
aaattttatgagctttttgaaatggatgcacatgtaggagcaaaagagcttgaattgcag
tatatgaggggagagcaacctcattgtggttttccagagaagaatttcacagtgaatgta
gagagactagctagaaagggttatcgagttcttgttgtagagcagactgaaacacctgaa
cagatggagcttcggcgcaaggagagcggctctaaagataaggttgtgagacgggaaata
tgcgcagtggtttcaaaaggcacattaatagatggggagtttatgtcaaccaatcctgaa
gctgcatatttaatggcactgactgagtactgtgagaacaatccaaatgaaatgtcagag
cgcacgtacggtgtttgtgtagttgatgtcgctactagcagagtcattcttgggcagttc
aacgatgactcagagtgcagtgccttgtgctctatcttgtctgagatcaggccagttgaa
attgtgaaacctgctaaactactcagtgctgaaacagaaagggcactgctgaaacacacg
agaaaccctctagtgaatgagttaattccaaatgtggaattctgggatgctgataaaact
ttggatcatctgaagagaatttatggccacaataacgatgttagtgctcaagatggcggg
ttagattgtctgccagatgttttagtggagctggtgaaaacagatcatgacagtagaagt
gcactctcagcacttgggggtgctctctattatttgaaacaggctttcctagatgagcag
ttgcttagatttgcgcagtttgagttgcttccatgttctgttttcagtggtcttgcttca
aaaccatacatggttcttgatgctgtagccctagagaatctcgagatatttgagaatagc
agaaatggagagtcttcaggcacgctctatgctcaattaaaccaatgtgttacggcgttt
gggaagagactgctaaagtcatggcttgcaagaccgttatatcacgtggagtcaataaag
gaacgccaggaagctgttgctggtttaaagggagtaaatctacctcacacattagaattt
cgaaaagcattatcaaagttacctgacatggagcggttgctggcacgggtgctctcttct
agggatgctagtggaaggaatgctaataaagtggttctgtatgaggattcatcaaagaaa
caactgcaagagtttatttcagccctgcgtggtcttgaacttatggcacaagcttgcttg
tcactcggtgttattttgaataatgtcaaatccagacagcttagtcatcttttaacacct
ggtaaaggtcttcctgatgtaagcatggatctgaatcatttcaaggatgcctttgattgg
gtggaagccaataactccggccgtataatacctcatgaaggagttgacaaagaatatgat
tcagctggtaaggcagttaatgagattgagtccagtttgttagatcatctcaaggaacaa
aggaaattacttggaagcacatcaatctcttatgttggtattggaaaggacacataccta
ttggaagtgcctgaaaatttgtctcagaatattcctcgggattacgagaggcgttcatcc
aaaaaaggtttcgttaggtattggactccagatattaaaatatttttgaaagagctctct
catgctgaatctgaaagggagaccttattgaaaagtacatttcagagaatgatagagcgt
ttttgtgaacatcacactcagtggaagcagttggtgtctgcaactgctgagttggatgtt
ttgatcaatttagctattgccagtgattactatgaaggaccaacctgcagaccaagtttt
gttgggaccttatgtacaaatgaagctccctacatctatgctaaaagtctgggacacccc
gttcttaggagtgataccttaggaaagagtgcctttgtacctaatgacataaccataggt
ggtccagaccaggcctcctttattcttcttacaggtcctaacatgggtgggaagtcaact
cttcttcgccaagtttgcttggctgtgattttggcccaggtaggggctgatgtcccttca
gaaagttttgaattgtctcctgtggaccgaatttttgttcggatgggtgccagagataat
atcatggctggccaaagtacatttttaaccgagctttcagaaactgcaacaatgctgtca
tcagccactcgtaattcattggtggctctggatgagcttgggcgtgggacctcaacgtct
gatggacaagccattgcggaatcagtattagaacatcttgtacgtagcgtgcagtgtcgt
ggattgttttctacacactatcatcgattagctatagattatctcaaagatcccaaggtc
tgtctcgctcacatggcatgccaagttggtagtggaaatgaaggtttggacgaagtcacc
tttctttacaggctgtccgcaggtgcttgccccaagagctacggtgttaatgttgctcgg
ttagctggactacccacttctgtgcttcagaaggctgatgccaagtccagagaatttgag
gccacgtatggtaaatacagaactgaaccaaactcttccaatcaaagttgggttgatgag
ataatagtcttggtacaaaaattgaacaatgctgccaataatttgagttgcgaggagatg
gtttccgatcactctatagtaaagcttcagcgtgaagcaagagaactgctagaacgatgt
taa

KEGG   Medicago truncatula (barrel medic): 11436735
Entry
11436735          CDS       T01716                                 
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    11436735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11436735
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     11436735
SSDB
Motif
Pfam: MutS_V MutS_I MutS_III MutS_II AAA_29
Other DBs
NCBI-GeneID: 11436735
NCBI-ProteinID: XP_003620513
UniProt: G7KNH7
LinkDB
Position
6:complement(39778366..39787493)
AA seq 1155 aa
MIRQKSILSFFHKTSPENRTSAAAKTTAPSAPQSNPEDRTIKPVVNPPPPSDDVRGTDTP
PEKVPRQVLPANYVANTKNSGSCLFESIMHKFIKVDDGEKVNQRSQSSNPDSFPKPSPSS
NIFTDTNRKGLQKEVAAAFEPLVKAKDNAVNFKEKVSHDNTFRSQSSNHDSFPRPSPPSS
IFTNTNRKGLQRDAAAFEPVVKAKDNAVNFKQKVNSGNTFLFENDDDITGPETPGMQPLT
SNVKRKVEDVSKLSSLRDSGKRVRFLDDSISLDMTKKELEIASKFEWLDPSRIRDANGRR
PDDPLYDRTTLYIPPEVLRKMTASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDAEIGHK
ELDWKITLSGVGKCRQVGISESGIDDAVKNLVARGYKVGRVEQLETSEEAKARGANSVIQ
RKLVQVVTPSTNVDGNIGPDANHLLAIKEESNGSDNGSVTYGFAFVDCARLRLWVGSIDD
DASCSALGALLMQVSPKEIIYERRGVSKEAEKAFRKFSLNGSTTLQLTPMRSITDLVTSE
ISDLIHSKGYFKGSSNSLDHVLTNVIHCEITLSALGGLIGHLNRLMLDEVLQNGDIYPYQ
VYKGCLKMDGPTYINLEIFGNSNDGGKAGTLYKYLDNCVTSSGKRLLRNWICCPLKDAEG
INNRLDVVDHLIASPVIVSHIAQHLRKLPDLELLLGRTKSSLKVSSPILLPLLVKKILKQ
RVKVFGSLVKGLRTTLSLLLILQKEQPLISSLTKVFKLPVLTGSDGLDQFLTQFEAAVDS
DFPNYQNHDVTDTDAETLTILAELFLEKANQWFEVVHAINCIDVLRSFAVTSSFSCGTMS
RPVIVPTSKSTSKDSGAPVLKMKGLWHPFALGETGREPVPNDMILGENEGGHHPRTLLLT
GPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIE
CTETASVLHNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLT
KEFASHPRVTMQHMACAFKSKSDTLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEK
TVNVASKASQQMKISIGKNFRSSEQRSEFSSLHEEWLKTLMSIARIEDVESFDDDVLDTL
VCLRYELKSSFKSGN
NT seq 3468 nt   +upstreamnt  +downstreamnt
atgattcgccaaaaatcaattctctcattcttccataaaacctcgccggaaaatcgcact
tccgccgccgcaaaaaccaccgctccatccgctccgcaatccaaccccgaagatcgtact
atcaaaccagtcgtcaatccaccgccgccgtcagatgacgtcagaggaactgacactccg
ccggagaaggtgccgcgtcaggttttaccggctaactacgtggcgaacacgaagaactca
ggttcttgtttgtttgagagtatcatgcataagtttattaaggtcgatgatggcgaaaag
gttaaccagaggagccagtcatcaaatcctgatagcttccccaaaccatctccatcatca
aatatatttaccgatactaaccggaaaggactgcagaaagaagtagcagcagcttttgaa
cctttggtgaaagccaaagataatgctgtaaatttcaaagaaaaagttagtcatgataat
acgttcaggagccagtcatcaaatcatgatagcttccccagaccgtctccaccatcttct
atatttactaatactaaccggaaagggctgcagagagatgcagcagcttttgaacctgtg
gtgaaagcgaaagataatgctgtaaattttaaacaaaaggttaacagtggaaacacgttc
ctgtttgaaaatgatgatgatattactggaccagaaaccccaggaatgcaacctcttact
tctaatgtaaagcgaaaagtagaggatgtgtccaagctttcttccttgcgggattcgggc
aaacgagtcagattccttgatgattcaatatcactggacatgaccaagaaggagttagaa
atagctagcaagtttgagtggcttgatccttctcgaatcagggatgcaaatggaagaagg
cccgatgatccgttatacgacagaactacactttatatacctcctgaggttttgagaaaa
atgactgcatcgcagaaacagtattggagtgtcaaatgtaaatatatggatgttttgctg
ttctttaaagtgggaaaattttatgagctttatgaaatggatgctgaaattggccataag
gagctcgattggaaaataacattaagtggtgtgggaaaatgtcggcaggttggtatatct
gaaagtgggattgatgatgctgttaaaaacctggttgctcgtggatataaggttgggcga
gtggagcaattggagacatctgaagaagcaaaagctagaggagctaattctgttattcaa
agaaaattagttcaggtagtcaccccatcaaccaatgtggatggtaatattggccctgat
gcaaaccatcttcttgcaataaaagaggaaagcaatggctcggataatggttcagttaca
tatggatttgcttttgttgattgtgctcgtcttaggttatgggttggttctattgatgat
gatgcgtcatgttctgctttgggggctttattgatgcaagtgtcacccaaggaaattata
tatgaacgcagaggggtatccaaagaagctgagaaagcatttagaaaattctctttaaat
ggttccacaacactacaattgactcctatgcggtcgatcactgacttggtgacctcagaa
attagtgatttaattcactcgaaaggatactttaagggttcgtctaattcactggatcat
gtgctgaccaatgtgattcactgtgaaatcacgttatctgctcttggtggactgataggt
catctgaatagattgatgctagatgaggtccttcagaacggggacatttatccataccag
gtttataagggttgcctcaaaatggatggtccaacctatataaatctagaaatctttggc
aatagcaacgatggtggaaaagcaggtacattgtacaagtatcttgataactgtgttact
tcatctggaaagcggcttcttaggaactggatctgttgtccattgaaagatgctgaagga
attaataataggcttgatgtggtagaccatctaatagcttcccctgtaattgtgtctcat
attgcacaacatcttcgtaagcttccagatttggaactattacttggccgaaccaagtcc
agcctaaaagtatcaagccctatcttactgcccttgttggtaaagaaaatattgaaacag
agggtgaaagtgtttgggtcacttgtgaaaggccttcggactactctgagtttgttgctt
atactacagaaagagcagcctctaatatcatccttgaccaaagttttcaaacttccagtt
cttactggaagcgatgggctcgatcaatttcttactcagtttgaagcagctgtagatagt
gatttcccaaattaccaaaatcatgatgttacggatacagacgccgaaacactcacaata
cttgctgaactatttttggagaaagctaatcaatggtttgaagttgttcacgccatcaat
tgcattgatgtactaagatcttttgctgttacttccagcttttcatgtggaactatgtct
aggcctgttatagtgccaacatcaaaaagtacaagtaaagatagtggagcacctgtgctc
aaaatgaagggactgtggcatccatttgctcttggagagactggacgtgagcctgttcca
aatgacatgatccttggcgagaatgaaggtgggcatcatcctcgcacattgcttctgaca
gggccaaacatgggtggaaaatcaacacttttgcgtgctacctgtctagctgttattatg
gcccagttaggatgctatgtgccgtgcgaaaattgtgttctttcagttgtggatatcatc
ttcacacgccttggagccacagatagaatcatggcaggcgagagtaccttctttattgag
tgtacagaaactgcatcagtgcttcataatgctactcaagattctcttgttatccttgat
gaattgggtcggggaacaagcacttttgatggctacgccattgcatatgctgtattccgg
catctgattgaaaaggttaactgtcgattgctatttgcaacgcattaccatccgctaaca
aaagaatttgcatctcatccacgcgttacaatgcaacacatggcttgtgctttcaagtca
aaatctgataccctttccaaacaagatcaggaactagttttcctataccggcttgccccc
ggggcatgtccagagagctacggattgcaggttgcacttatggctggaatcccagaaaaa
actgtgaacgttgcttcaaaggcaagccagcagatgaaaatatcaattggcaaaaacttt
aggtcaagtgaacagagatcagagttttcatctcttcacgaagaatggctgaagaccttg
atgtctatcgcaagaatagaggatgttgaatcttttgatgatgatgttttagatacatta
gtctgtttgcggtatgaactaaagtcttcgtttaaatcaggtaactag

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