Medicago truncatula (barrel medic): 11432951
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Entry
11432951 CDS
T01716
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11432951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11432951
03009 Ribosome biogenesis [BR:
mtr03009
]
11432951
04131 Membrane trafficking [BR:
mtr04131
]
11432951
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11432951
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
11432951
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
11432951
Membrane trafficking [BR:
mtr04131
]
SNARE
SNARE associated proteins
Others
11432951
Autophagy
Aggrephagy
Other aggrephagy associated proteins
11432951
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
11432951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
AAA_28
Parvo_NS1
AAA_18
ATPase_2
IstB_IS21
ABC_tran
Vps4_C
AAA_7
Viral_helicase1
NB-ARC
AAA_lid_PRS2_C
AAA_24
NACHT
TsaE
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
11432951
NCBI-ProteinID:
XP_003625676
UniProt:
G7L3V5
LinkDB
All DBs
Position
7:complement(48035597..48039916)
Genome browser
AA seq
809 aa
AA seq
DB search
MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG
DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV
HILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDFFLVRGGMRSVEFKVIETDPHEYC
VVAPDTEIFCEGEPIKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFATALGSSNPSALRETVVEVPNCS
WDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKACLRKSPISKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSE
NPEAMEEDIEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFA
DSGTSGAAAAGASDPFSSAAGADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaacccgaatcctccgatgctaagggaactacaaaaagagatttcagcact
gcaattctcgaacgcaaaaaagccccaaatcgtttggttgttgatgaagctgttaacgat
gacaactccgtcgtcgctcttcatcccgagactatggaaaagcttcaactattccgcggt
gacactatcttgatcaagggtaagaaaaggaaagatactatatgtattgcactcgctgat
gaaacatgtgaagagccaaaaataagaatgaacaaggttgtgaggaacaatcttagggtt
aggcttggagatgttgtttcggtgcatcaatgtgctgatgtcaaatatggaaagagagtt
cacattcttcccgtcgatgatactattgaaggagttactgggaatctctttgatgcatac
ttaaaaccttatttcttggaggcatatcgaccagtgaggaaaggtgacttcttccttgtg
agaggtgggatgagaagtgtagaattcaaggttattgaaaccgacccacatgagtactgt
gttgttgcccctgacacggagattttctgtgaaggagagcccattaaaagggaagatgag
aatcgcttagatgaggttggttatgatgacgttggtggtgtgagaaagcagatggcacag
attagggaactggttgaattgccactgaggcacccacaattattcaagtctattggtgtc
aagccaccaaaggggattctcttgtatggaccccctggttctggaaagactttaattgct
cgggcagttgcaaatgaaacaggtgccttctttttctgcattaatggccctgagataatg
tcgaaacttgctggtgagagtgaaagcaatctaaggaaggcatttgaggaagctgagaag
aatgcaccttccatcatctttattgatgagatagattccatagctcctaagcgagagaaa
actcacggtgaagtagagaggaggattgtctcccaactcttgacccttatggatggtctt
aaatcacgtgcacatgtaattgttatgggagccacaaataggcccaatagcattgaccct
gcacttaggaggtttggaaggtttgatagggagattgatattggtgttccagacgaggtt
gggcgtcttgaggttcttcgaattcatacaaagaatatgaaactcgccgaagatgttgat
ttagaaaagatttctaaggagacacatggctatgttggtgctgatttagctgctttgtgt
accgaagcagcacttcaatgcatcagggaaaaaatggacgtgattgacttggaagatgag
acaattgatgctgaaatattgaactccatggcagtgacaaatgagcatttcgcgactgcg
ctcggatcaagcaatccttctgctctccgtgaaacagttgttgaagtgcctaattgcagc
tgggatgatatcggcggtcttgaaaatgttaagagggaactccaagagactgtccaatat
ccagtggaacaccctgaaaagtttgagaagtttggaatgtcgccttcgaagggagttctt
ttctatggtcctcctggatgtggtaaaacactattggcaaaagctattgccaatgaatgc
caggcaaactttatcagtatcaaaggtcccgagctactcacaatgtggtttggagaaagt
gaggcaaacgtgagggaaatttttgacaaggcccgtggttctgctccatgtgtcctattc
tttgatgaacttgactccattgcaactcagagaggtagtagtgtaggagatgctgggggt
gctgccgacagggttttgaaccagttgctaacagaaatggatgggatgtcagcaaagaaa
actgtgttcatcattggcgcaactaatcgaccggacattatagatccagctcttctgcgt
ccaggccgtctagaccagttgatttatatccccctcccagatgaagattcccgtcatcag
atatttaaagcttgcttgagaaaatctcccatctctaaagatgttgacattagagctctt
gcaaagtacacccaaggctttagtggtgctgatattactgagatttgccagcgtgcttgc
aagtatgccataagagagaacattgagaaggacattgaaaaagagagaaagagaagcgag
aaccccgaggccatggaagaggacattgaagatgaagtagctgaaatcaaggcagctcat
tttgaggaatcgatgaaatacgctcggaggagtgtaagcgacgctgacattcgcaagtac
caggcattcgcccaaacattgcagcagtccagagggtttggaaccgagtttcggtttgca
gattctggcaccagtggtgctgctgctgcaggtgcatctgatccattttcatctgctgct
ggagctgatgatgatgatctttacaattag
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integrated database retrieval system