KEGG   Medicago truncatula (barrel medic): 11432951
Entry
11432951          CDS       T01716                                 
Name
(RefSeq) cell division control protein 48 homolog D
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    11432951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11432951
   03009 Ribosome biogenesis [BR:mtr03009]
    11432951
   04131 Membrane trafficking [BR:mtr04131]
    11432951
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11432951
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     11432951
Ribosome biogenesis [BR:mtr03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    11432951
Membrane trafficking [BR:mtr04131]
 SNARE
  SNARE associated proteins
   Others
    11432951
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    11432951
Exosome [BR:mtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   11432951
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 AAA_5 CDC48_2 AAA_22 AAA_33 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 Mg_chelatase nSTAND3 AAA_28 Parvo_NS1 AAA_18 ATPase_2 IstB_IS21 ABC_tran Vps4_C AAA_7 Viral_helicase1 NB-ARC AAA_lid_PRS2_C AAA_24 NACHT TsaE Zeta_toxin DUF815 Zot
Other DBs
NCBI-GeneID: 11432951
NCBI-ProteinID: XP_003625676
UniProt: G7L3V5
LinkDB
Position
7:complement(48035597..48039916)
AA seq 809 aa
MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG
DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV
HILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDFFLVRGGMRSVEFKVIETDPHEYC
VVAPDTEIFCEGEPIKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFATALGSSNPSALRETVVEVPNCS
WDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKACLRKSPISKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSE
NPEAMEEDIEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFA
DSGTSGAAAAGASDPFSSAAGADDDDLYN
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcgaatcaacccgaatcctccgatgctaagggaactacaaaaagagatttcagcact
gcaattctcgaacgcaaaaaagccccaaatcgtttggttgttgatgaagctgttaacgat
gacaactccgtcgtcgctcttcatcccgagactatggaaaagcttcaactattccgcggt
gacactatcttgatcaagggtaagaaaaggaaagatactatatgtattgcactcgctgat
gaaacatgtgaagagccaaaaataagaatgaacaaggttgtgaggaacaatcttagggtt
aggcttggagatgttgtttcggtgcatcaatgtgctgatgtcaaatatggaaagagagtt
cacattcttcccgtcgatgatactattgaaggagttactgggaatctctttgatgcatac
ttaaaaccttatttcttggaggcatatcgaccagtgaggaaaggtgacttcttccttgtg
agaggtgggatgagaagtgtagaattcaaggttattgaaaccgacccacatgagtactgt
gttgttgcccctgacacggagattttctgtgaaggagagcccattaaaagggaagatgag
aatcgcttagatgaggttggttatgatgacgttggtggtgtgagaaagcagatggcacag
attagggaactggttgaattgccactgaggcacccacaattattcaagtctattggtgtc
aagccaccaaaggggattctcttgtatggaccccctggttctggaaagactttaattgct
cgggcagttgcaaatgaaacaggtgccttctttttctgcattaatggccctgagataatg
tcgaaacttgctggtgagagtgaaagcaatctaaggaaggcatttgaggaagctgagaag
aatgcaccttccatcatctttattgatgagatagattccatagctcctaagcgagagaaa
actcacggtgaagtagagaggaggattgtctcccaactcttgacccttatggatggtctt
aaatcacgtgcacatgtaattgttatgggagccacaaataggcccaatagcattgaccct
gcacttaggaggtttggaaggtttgatagggagattgatattggtgttccagacgaggtt
gggcgtcttgaggttcttcgaattcatacaaagaatatgaaactcgccgaagatgttgat
ttagaaaagatttctaaggagacacatggctatgttggtgctgatttagctgctttgtgt
accgaagcagcacttcaatgcatcagggaaaaaatggacgtgattgacttggaagatgag
acaattgatgctgaaatattgaactccatggcagtgacaaatgagcatttcgcgactgcg
ctcggatcaagcaatccttctgctctccgtgaaacagttgttgaagtgcctaattgcagc
tgggatgatatcggcggtcttgaaaatgttaagagggaactccaagagactgtccaatat
ccagtggaacaccctgaaaagtttgagaagtttggaatgtcgccttcgaagggagttctt
ttctatggtcctcctggatgtggtaaaacactattggcaaaagctattgccaatgaatgc
caggcaaactttatcagtatcaaaggtcccgagctactcacaatgtggtttggagaaagt
gaggcaaacgtgagggaaatttttgacaaggcccgtggttctgctccatgtgtcctattc
tttgatgaacttgactccattgcaactcagagaggtagtagtgtaggagatgctgggggt
gctgccgacagggttttgaaccagttgctaacagaaatggatgggatgtcagcaaagaaa
actgtgttcatcattggcgcaactaatcgaccggacattatagatccagctcttctgcgt
ccaggccgtctagaccagttgatttatatccccctcccagatgaagattcccgtcatcag
atatttaaagcttgcttgagaaaatctcccatctctaaagatgttgacattagagctctt
gcaaagtacacccaaggctttagtggtgctgatattactgagatttgccagcgtgcttgc
aagtatgccataagagagaacattgagaaggacattgaaaaagagagaaagagaagcgag
aaccccgaggccatggaagaggacattgaagatgaagtagctgaaatcaaggcagctcat
tttgaggaatcgatgaaatacgctcggaggagtgtaagcgacgctgacattcgcaagtac
caggcattcgcccaaacattgcagcagtccagagggtttggaaccgagtttcggtttgca
gattctggcaccagtggtgctgctgctgcaggtgcatctgatccattttcatctgctgct
ggagctgatgatgatgatctttacaattag

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