Medicago truncatula (barrel medic): 11433228
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Entry
11433228 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11433228
04121 Ubiquitin system [BR:
mtr04121
]
11433228
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11433228
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
11433228
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11433228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
HypA
DUF5936
HVO_B0008_N
zf-C2HC5
Motif
Other DBs
NCBI-GeneID:
11433228
NCBI-ProteinID:
XP_003601604
UniProt:
G7J9L6
LinkDB
All DBs
Position
3:41115443..41117871
Genome browser
AA seq
356 aa
AA seq
DB search
MDETMAARYWCHACSQIVSPVMGMEIKCPLCQSGFIEEMSSATGISDLQNTPETDFGVDR
SPSLWAPILLGMMGNPRLRRRLRRIELEDDYESGNRDDDHGGVGHYDRELESILRRRRRS
SATIQQLLQGIRAGLTSESHENTDSDDRVREREREHVILINPFNQTIIVQGSYDSNRDQS
DNHNPIGALGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVESLPTVKINENLQCSVC
LDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNHRNQR
DDEIIGHANANAEGDSEGRSPSGGRRFSFPWPFNGLFSSSSSSSNANGNGTQSERN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacaatggcggcaagatattggtgtcacgcgtgttctcaaatagtcagtccc
gtcatgggaatggagatcaaatgtccactttgccaaagtggatttattgaagaaatgagc
agtgctactggtatcagtgacttgcaaaatacaccagaaactgattttggagtggatcgt
tctccctctctttgggcaccaatcttgctaggcatgatgggtaatccgcggcttcgtcga
agattgagacgaatagagcttgaagatgattatgaaagtggtaatcgtgatgatgatcat
ggtggtgtaggacattatgatcgagagcttgagtccatccttcgaaggaggagaagaagc
tcagctaccattcagcaattgctccaaggcataagagctggactgacatctgaatcacac
gagaatactgacagtgatgaccgtgttagggaaagagaaagagagcatgtaatcttgatt
aatccttttaatcagactattattgttcaaggttcctatgattcaaaccgagatcaaagt
gataatcataacccaattggggctcttggtgactatttcgtagggcctggtttggatcta
ttgttgcaacatttgtctgagaatgaccctaataggtatggaactccacctgcaccgaag
gaagccgttgaatctctacctactgtgaagattaacgagaatttgcagtgttctgtctgt
ttggatgattttgaagttggttctgaagctaaagagatgccatgtaaacataggtttcat
agtgcttgtatcctaccctggctggagcttcatagttcttgccctgtttgcaggtctcaa
ttgcgagtggatgaacctaagcaagactctgatgtgtcaaggaatcacagaaatcaaagg
gatgatgaaattattggacatgccaatgccaatgctgaaggagatagtgaagggagaagt
ccaagtgggggtagaagattctcatttccatggcctttcaatggattattttcttcatca
tcttctagttccaatgcaaatggaaatggtactcaatcagaaagaaactga
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