Medicago truncatula (barrel medic): 11433283
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Entry
11433283 CDS
T01716
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11433283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11433283
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
11433283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_8
IL6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
11433283
NCBI-ProteinID:
XP_024635997
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Position
1:35970724..35973596
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AA seq
533 aa
AA seq
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MDSTVPSYQHRTLSIKLWPPSQSTRSMLVGRMVRNLTTPSIFSRKYGLLNKDEAEKDAKE
IEDAAFVTATQHFEKEPDGDGSSAVQIYAKESSKLMLEVLKRGPRGKEENGELISEKGDA
AVETVFDISGGRRAFIDGEEASELLKPLMGPNSFTNICFSNRSFGLDAAHVVEPMLISIK
DQLKEVDLSDFIAGRPEAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKS
QNDLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPAL
EDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIY
LSYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSE
NELKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFIS
DEGIDELKDIFKNSPDILGPLDENDPEGEDIDEEAEENSDNDELESKLKGLEI
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggattctaccgtaccgtcgtaccaacaccgaacactttcaatcaagttgtggcctcca
agtcagagtactaggtcgatgttggttggacggatggtcaggaacttgacgactccgtcc
attttctctagaaagtatggacttcttaacaaagatgaggctgagaaggatgcaaaggaa
attgaggatgcagcttttgtgactgcgacccaacactttgaaaaggagcccgatggtgat
gggagttctgctgtgcaaatttatgccaaggaatcgagtaagcttatgttggaggttttg
aaaagaggaccaagagggaaggaggagaatggggagttgatatctgaaaagggtgatgct
gctgttgaaactgtttttgacatttctgggggtcgcagagctttcattgatggggaggaa
gcttcagagcttctaaaaccattgatgggaccaaactcttttacaaatatatgtttcagt
aatagaagttttggtttggatgctgctcatgtcgttgaacccatgctaatatcaattaaa
gatcaactgaaagaggtagatctgtcagattttattgctgggagaccagaagcagaagct
attgaagtgatgaatatattttcttctgcactagaaggagctgtgttgagacatcttaac
ctgtcaaataatgccatgggcgaaaagggggttagagcattccgggcactccttaaatca
caaaatgacttggaggagctttatttgatgaatgatggtatatcagaggaagctgcaaaa
gcagttgctgaattgatcccttccactgagaagcttaaggttcttcatttccataataac
atgactggagatgaaggagcatttgcaatagctgatgttatgaaacgttccccagctttg
gaagattttcggtgttcatctaccagagtaggcgctgaaggtggtgttgctcttgctgaa
gcgcttggggcttgcacgcatttgaagaagcttgatttgcgtgacaacatgtttggtgtg
gaagctggagttgctctaagtaaagttatacctgtatttgctgatcttacagagatatac
ctcagttatttgaacttagaggacgatggtgcagaagcccttgctaatgctttgaaggaa
tctgcaccgtcactggaaattttggatatggctgggaatgacattactgctaaaactgct
gtttctgtagctgaatgtatatcatcaaagcagttcctcaccaagttaaatttatccgag
aatgaattgaaagatgaaggtgcaggtttaatcagtaaggcgctggaaggtcttggccaa
ttaagtgaagttgatctgagtacaaatttgatcacatggtcaggagccaaactgttggca
gaagctgttgtccagaaacctggatttaagttgctgaatgttaatgctaacttcatttct
gatgaagggattgacgagttaaaggacatatttaaaaactcacctgacattctgggtcct
ttggatgagaatgatcctgaaggagaggacattgatgaagaggctgaagaaaattccgat
aatgatgaattggagtcaaaactgaaaggccttgagatttaa
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