Medicago truncatula (barrel medic): 11433288
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Entry
11433288 CDS
T01716
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DUF2469
Motif
Other DBs
NCBI-GeneID:
11433288
NCBI-ProteinID:
XP_003590707
UniProt:
G7I2M0
LinkDB
All DBs
Position
1:36233466..36251765
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AA seq
1258 aa
AA seq
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MQNQQNGRISAYFSASKPLLPQKRASDSSISSPYQIKSLCDVDGAKGRVRVGKRVPLAEV
PLNRLHSSGNGGEASSDVICCSSSARTVVVPAVSAVKENLCQSNFETPRKESGGFESESL
DYFYASGLLDDDFDDSILEQIDIMCEEKSAVKTAGVEGLGHSCHEKVSSEGNVVGNVDMG
LGTNVSKDIGNDDLNESILEQIDILFEQKSAEKEAGMGIEHNCRERVSSESSVVSNVDMD
LGTSAFPKDIGNGEIDDFDESILEQIDILCEQKSAVKAAGQGLDQSCQENVSSESGLVCT
VDMSLATSAVSEGIGSGDMLCFGIDLDHKEEHVDSETTRKSLPSGTMPEEYSKYLKSLNE
RQREAACTDVSTPLMIVAGPGSGKTSTMVGRVLMLLNEGISPLNILAMTFTAAAAAEMRK
RIGAIAGKQTAKELTISTFHSFCLQLCRSHAEKLGRTSEFLIYGQWQQRNAIIEATRLLE
NETSKHKNGELLIGEASDGLKTPKQFKDKAKKWQNFVTQAKASGRTSAEYRDMGNQIGAE
ILENYSNILKSCNAVDYHDLISYSVKLLTDFPEVFRESQDSWKAVVIDEFQDTSAMQYKL
LRILASHNKITIIGDDDQSIFSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRYIVEAA
ASLIQNNAKRCQLKNVLTDNSSGSKIIMKECHNEDAQCAFIVDKISEISSNHSADNCSYG
NIAILYRRRVSGKAFQMAFRDRKIPFNIHGVAFYRKKVVKTIISMLQTALPGCDDDSYSR
VFKALLPFEKDMKKRVIDHISKISTIRKCSFLSAACDIFSAKISGTYKRSDLTHGRKVLT
TIEIISKLVHREKSISAIITSVANMIPEKYLLEQRAIVDVDGGTLLNEDCDIRSVLQYLL
DDISEFLSTKFIEVRGEKEMSEDKGCIFTLKAFIDYLFEREKENFRARRKDNENSVTLTT
IHQAKGLEWDIVFIVKANESEIPLLHDFKGVVKDTAAIVEEERRLLYVAMTRARQKLFML
YVMVDSNWQMLQPSRFLKEIPHHLLEFQGDINMQELQIKREGHQKETTCCTTDLLIKKQQ
SEADLDPVPNNLLNNHFSEASSELAEFAEANNGNDFIRRFDVEDRSVVSHIFHKWAKKKA
FQDPKRLLDKVGFVIDERLRQKKNKHKDLLNSLKSSLSCDEAMQYAQYVLRWEQIPADKR
AHLMREKQEHFLKLKIENAMGSATPTDKQISYLKKLGCTMTPTSRLHASHLIEQYKSL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccagcaaaatgggcgaatcagcgcatatttcagcgcctcaaaaccactcctt
cctcagaaacgggcttccgattcatccatctcttccccataccaaatcaagagtttatgc
gatgttgatggtgccaagggtagggttcgagttgggaagagagttcctcttgcagaagtt
ccgttaaacagattacattcatccggtaatggtggcgaagcatcttctgatgtaatttgc
tgtagttcaagtgcaaggactgttgttgttcctgctgttagtgcggtgaaggagaatttg
tgtcaatcgaattttgaaactccgaggaaagaatctggaggatttgaatctgaatcactt
gattacttttatgctagtggattattggatgatgattttgatgactctattttggaacaa
attgatattatgtgtgaggagaaatctgcggtgaaaacagctggggtggaggggttaggt
catagttgtcatgagaaagtctcgagtgagggtaatgtagttggtaatgtggatatggga
ttgggaactaatgtttctaaagatataggaaatgatgatttgaacgagtccattttggaa
caaattgatattctctttgagcagaaatctgcggagaaagaagctgggatggggatagaa
cataactgtcgggagagagtttccagcgagagcagtgtagttagtaatgttgacatggat
ttgggaactagtgcttttcctaaggatataggaaatggcgaaattgatgattttgatgag
tctattttggaacaaattgatattctttgtgagcagaaatccgcggtgaaagcagctggg
caggggttagatcaaagctgtcaggagaatgtttcaagcgagagcggtttagtttgtact
gttgatatgagtttggcaactagtgctgtttctgagggtataggaagtggtgacatgctt
tgttttggaatcgatttggatcataaagaagaacatgtggatagtgagactactaggaaa
agtttaccgagtggaaccatgccagaggaatattctaaatacttgaaatcactaaatgaa
aggcaaagagaagcagcttgcaccgatgtttctacccctttaatgattgtagctggtcca
ggaagtggaaagacatccacaatggttgggcgagttttgatgctgcttaatgagggcatt
agtcccttaaacattcttgcaatgacatttacggcagcagcagctgctgaaatgagaaaa
cgtattggagccatagctgggaagcaaacggcaaaagaacttacaatcagcacttttcat
tcattttgcttgcaactttgtcgttcacatgcagaaaagttaggtcgtacatctgaattc
ttaatatatggtcagtggcaacagcggaatgcaattattgaggccacccgattattagaa
aatgaaacaagtaaacataaaaatggtgaattgttgattggagaagcgtccgatggtcta
aagacccctaaacagttcaaggataaggcaaagaaatggcaaaattttgtgactcaggcc
aaagcctcgggaagaacttctgcagaatatcgtgatatgggcaatcaaataggagcggaa
attcttgagaattacagtaacatattaaaatcttgtaatgccgtggattatcatgacttg
atcagctactctgtgaaattactcactgattttcccgaagttttcagagaaagtcaggat
tcatggaaagctgttgtcatagatgagttccaagatactagtgccatgcaatacaagctt
ctaaggattcttgcatcccataataaaataacaattattggtgacgatgatcagtccatt
ttcagtttcaatggagctgacatttccggatttatttcctttcgtaatgattttccaaac
tacaaagagattaggctcaacaaaaactatcgctccacacgttacattgtcgaggctgca
gcttctcttattcaaaataatgccaagcgatgtcagttgaagaatgttcttactgataac
tcttctggatccaagataattatgaaggagtgtcacaatgaggatgcacaatgtgcattc
attgttgacaaaatctcagaaatttcatctaatcattcagcagataactgttcctatggc
aacattgcaattctctaccgtaggcgggtatcagggaaagccttccaaatggcttttcgg
gataggaaaataccatttaacattcacggtgtagctttttacagaaaaaaggtagtcaaa
actatcatctctatgcttcaaacagcactgcctggttgcgacgatgactcatatagtcga
gtcttcaaggctttacttcctttcgagaaggatatgaaaaagagggtaatcgaccatatt
agcaaaatttcaaccattagaaaatgcagtttcttatcagctgcctgtgacatctttagt
gcaaagatttctggtacttataaaaggagtgatcttacccatggaaggaaggttttaacg
acaatagagatcatatcaaaacttgttcacagggaaaagtcaatttctgctatcataact
tctgtagcgaacatgatacctgagaaataccttcttgagcaacgggcaattgttgatgtt
gatggagggacattgttgaatgaagattgtgacatcagatctgttcttcaatacctatta
gatgatatctctgagtttttgtctaccaaattcattgaggtaagaggggaaaaggaaatg
tcagaagataaaggctgcatttttacgttaaaagcattcattgattatttatttgagcgc
gagaaagaaaattttcgtgctcggaggaaggacaatgaaaattctgtgacactgactacc
attcatcaggcaaaaggtttagagtgggacattgtcttcatagttaaggcaaatgaatct
gagatccctctattacacgatttcaaaggtgttgtgaaggacactgcagccatagttgag
gaagaaagacgtttactatatgttgcaatgactcgtgctcggcagaagctttttatgctc
tatgtcatggtggactcaaattggcagatgcttcaaccttcacgatttctgaaagaaatc
cctcatcatcttctagagtttcagggtgatataaatatgcaagaactacaaataaagcga
gaaggccatcaaaaggaaactacctgttgtaccactgatttgttgataaaaaagcaacaa
tctgaggctgatttggaccctgtgccaaataatttgctcaacaatcattttagtgaggct
tccagtgagcttgcagaatttgcagaggcaaacaacggcaatgatttcataagaagattc
gatgtagaagacagatctgttgtttcccatatattccataaatgggccaaaaagaaagcc
tttcaagatccaaagaggttgctagataaggttggttttgtaattgatgaacgcctaaga
cagaagaagaacaaacacaaggatttgttgaattctctaaagtccagcttaagctgtgat
gaagcaatgcagtatgctcaatatgttttgagatgggagcaaatccctgctgataaacgt
gctcatcttatgagggaaaaacaggaacatttcctgaaattaaagattgagaatgcaatg
ggttcggcaacaccaactgacaagcagatctcctatttgaagaaacttgggtgcaccatg
acccctacatcccgcctccacgcttctcatcttattgagcaatacaaatcattgtaa
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