KEGG   Medicago truncatula (barrel medic): 11433323
Entry
11433323          CDS       T01716                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    11433323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11433323
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     11433323
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR75_2nd ANAPC4_WD40 Beta-prop_DCAF12 RAWUL Beta-prop_Vps41 WD40_like Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 11433323
NCBI-ProteinID: XP_024626264
LinkDB
Position
7:complement(54239059..54250006)
AA seq 766 aa
MHRVASTGNANNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTSTISDGSDYLFTGSR
DGRLKRWALAEDAATCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNALSAGTCVR
THRQHTDYVTCLAAAGKNSNIVASGGLGGEVFVWDIEAALAPVSKCNDAMVDESSNGING
SANLLPSTNLRTISSSHSISLHTAQTQGYIPIAAKGHKESVYALAMDEGGSILVSGGTEK
VVRVWDTRSGSKILKLKGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDIGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPIRQLALHNDSIWVAS
TDSSVHRWPAEGCDPQKIFQRGNSFLAGNLSFSRARVSLEGSTPVPIYKEPTLTIRGTPG
IVQHEVLNNKRHVLTKDTSDSVKLWEITKGVVVEDYGKVSFKEKKEELFEMVSVPGWFTV
DTRLGTLSVHLDTQHCFNAEMYSADLNIVGKPEDDKVNLGRETLKGLLTHWLRKRKQRMG
SPAPANGELSGKDVASRSLIHSRAEVDVSSENDATVYPPFEFSVVSPPSIVTEGTHGGPW
RKKITDLDGTEDEKDFPWWCLDCVLNNRLTPRENTKCSFYLQPCEGSSVQILTQGKLSAP
RILRIHKVINYVVEKLVLDNKPLDNLHADGNFAPGVAGSQSLLPVVGDGSFRSGSGLKPW
QKLRPSIEILCCNQVLSPDMSLATVRAYIWKKGDDLILNYRVVQSR
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcaccgcgtggctagtacgggcaacgcaaacaattcaactcgccctcgaaaggaaaaa
agattaacatatgtgttgaacgactctgatgacacaaagcattgtgcaggcataaattgt
ctagccctacttacatctacaatatctgatgggtcagattatctatttactggaagccgt
gatggcaggctaaaacgatgggcgctagctgaggatgcggcaacatgctctgctaccttt
gaatctcacgtggactgggttaatgatgctgttcttgtcggtgacaacacacttgtttct
tgttcttcagatacaacccttaagacatggaatgctttgtccgctggaacttgtgttagg
acacaccgccaacatactgattatgttacttgcctcgcagcagctggaaaaaatagcaat
attgttgcctctggtggccttggtggggaggtttttgtgtgggatattgaagctgcgctg
gctccagtctctaagtgcaatgatgcaatggttgatgaatcttcaaatggcatcaatggt
tctgccaacttactaccttcgacaaacttgcgtactatcagctcaagccacagtatatcc
ttgcacactgctcaaactcaagggtacattccaattgctgccaaaggccataaggagtct
gtttatgcattggccatggatgaaggtggatcgattcttgtctctggtggcacagaaaag
gttgtacgtgtttgggacacaagatcaggatcaaagattctaaagcttaaagggcacaca
gataacatcagggctctacttctggattccactggaaggtattgtttatcaggatcatca
gattctatgataaggctttgggatataggtcagcagagatgtgttcattcttatgctgtt
catacagattctgtttgggcacttgccagcaccccaacatttagtcatgtttatagtggt
ggcagagacttttcattatacttgacagacttgcaaacaagagagagtagtttgctttgc
accggcgaacaccctattcgtcaattagctttgcacaatgatagtatatgggttgcatca
acagattcttcagttcatagatggcctgctgaaggatgcgaccctcaaaagattttccaa
agaggcaattcttttttagctggaaacttgtccttttcaagagcaagggtgtccctagaa
ggatctactcctgttcctatatataaagaacccaccttaactatcaggggcaccccggga
atagtgcaacatgaggttttaaataataagaggcatgtgctgacaaaggatacatctgat
tcagtgaagctttgggagattaccaaaggtgttgtggttgaagattatggaaaggtttca
tttaaggagaaaaaggaagagctatttgagatggtaagtgttcctggatggttcacagtg
gataccaggctcggaactttgtcagtccatttggacactcaacattgctttaatgcagag
atgtattcagctgatcttaacattgttggcaagcctgaagacgacaaggttaatttgggt
cgagaaaccctaaaaggactcttgactcattggttgagaaaacgaaagcaaagaatgggg
tctccagctccagctaatggggaattatctggaaaggatgttgcttctagaagtcttatc
cattcaagagctgaggttgatgtgagttctgaaaatgatgctacggtttatcctccgttt
gaattctcagttgtttcccctccatcgattgttaccgagggcactcatggaggtccgtgg
aggaaaaaaattactgatttagatggaacggaagacgaaaaagactttccctggtggtgt
ctagactgtgttttgaataatcggttaactcctcgagaaaatacgaaatgcagtttctat
ttgcaaccatgcgaaggctcttcagtccagatcttgacacaagggaagctaagtgctccg
cgtatattgagaattcacaaagttattaattatgtggtagaaaagttggtgctcgataat
aaacctttggataatttacacgctgatggtaattttgcccctggcgttgctgggtcacag
tcactacttccagtagtcggggatggatctttccgatctggatctggattgaagccttgg
caaaagcttagaccttcaattgaaatattgtgctgcaatcaggtgttatctcctgatatg
agcttagccacagtgcgagcttatatatggaagaaaggagatgacctaatcctaaattac
agagtggttcaaagcaggtga

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