KEGG   Medicago truncatula (barrel medic): 11433364
Entry
11433364          CDS       T01716                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mtr03036]
    11433364
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11433364
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    11433364
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     11433364
SSDB
Motif
Pfam: MMS19_N MMS19_C UTP20_N TOR1L1_N HEAT HEAT_EF3_N Telomere_reg-2 HEAT_IPO9_c
Other DBs
NCBI-GeneID: 11433364
NCBI-ProteinID: XP_003616940
UniProt: G7K7L4
LinkDB
Position
5:38348388..38359046
AA seq 1139 aa
MAETTQLTRHIDSYIHSSSTSTHQVSSLDAIGLLIKTNALTLEALVRELDVYLTSTDTVI
RSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERLADWKAVRGALVGCLELIRRKSDVG
MVTGSDAKAIAQYFIQHLHFQSLGLYDRKLCFELLDCLLEHHADSVASLEEDLIFGFCAA
IDAERDPECLMPAFHIVESLARLYPDPSGLFASFARDVFDLLEPYFPIQFTHTTSGDAHV
HRDDLSRTLMNAFSSTPLFEPFVIPLLLQKLSSSLHSAKIDSLQYLRVCSSKYGAERIAK
YVGAIWSSLKDTINTYLMEPNFSFTLAPTDGIDFPKNEVVIEALSLLQQLIVQNSSQLVS
LIIDDKDVNFIINSIASYEMYDAVSVQEKKKLHVIGRILYIFAKTSIPSCNAVFQSLLLR
MMDSLGFSVSNIDGLKNAGILASQSVNFGFLYLCIELLAGCRELVILSEEKPGTCFTILH
SSSDFLFNSFCSVLAVSADRFPPDPDIYIGVKGLQILAMFNLDVFPIPKSTFENILKKFM
SIIIEDFNKTILWNSTLKSLFHIGSLFQNFSESEKAMSYRSFVLDKTMELLSLDDISLPF
SLKLEVLSDIGMTSMKNMLKILQGLEGAIFANLSEVHRNLTSYDTAVQLLECYSCKLLPW
ILENGGAEEFILQFSVDIWNQAGNCMDFNSPFEEKGLLDATMKAMKFSVGCCSEESQNVI
ILKSYSILSSRTNFQLNDVQRLPLTFEKYDISLRDEGILLLFASVIIALRPKTHVPNIRG
ILHLFIITLLKGVVPVAQALGSMVNKLISKSNGAEKSDELTLEEALHIIFNTKICFSSDN
MLQICDGSINRNEIVLTDVCLGMTNDRLLQTNAVCGLSWIGKGLLLRGHEKIKDITKILT
ECLISDRNSSLPLIEGLDENNEEHKGDHLARKCAADAFHVLMSDAEDCLNRKFHATMRPL
YKQRFFSSMMPIFLQLISRSDSSSSRYLLLRAFARVMSVTPLIVILNDAKELISVLLDCL
SMLTEDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINCLIKLVDYSHKTLVRESC
IQCLVALSKLPHVRIYPLRTQVLEAISKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF
NT seq 3420 nt   +upstreamnt  +downstreamnt
atggctgaaaccactcaattgactcgtcacattgactcctacattcactcctcttccact
tcaactcaccaggtttcaagtttggatgcaattggattattgataaagaccaatgcttta
actctagaagcacttgttagagagctggatgtgtatttgacttcaacagataccgtaatt
cggtcaagaggaattcttcttctggcggaggtgcttactcgcatcaattcaatatctctt
gacagtaaaactatacatagcttggttgggttcttcaaggaaagactggcagattggaaa
gcagtacgaggtgcacttgtgggttgcttggaacttataaggaggaaaagtgatgtgggt
atggtaacgggtagtgatgccaaagccattgctcaatattttatacaacacttgcatttt
caatccttaggactgtatgacaggaagctatgctttgaactgcttgattgcctgctagaa
catcatgccgattcagttgcctcattggaggaggaccttatttttggattttgtgcagct
atagatgcagaaagggatccagaatgtttaatgcctgcttttcatattgttgagtctttg
gcacgattatatcctgatccatccggtctatttgcaagctttgctagagatgtttttgat
cttttagaaccttactttcccattcagtttacacatacaaccagtggggatgctcatgtg
cacagagatgacctatcaaggactctgatgaatgcattctcttctacacctctttttgag
ccatttgttattcctctccttcttcagaaactttcttcttcactacattcagcaaagatt
gattccttacagtatcttcgagtgtgctcttccaagtatggagcagagagaatcgcaaaa
tatgttggggctatttggtcttcattaaaagacaccataaatacctatttaatggagcca
aatttctcttttactctagcacccacagatggtattgactttccaaagaatgaagttgta
attgaagctctgtccctccttcagcagcttattgtgcaaaatagtagtcagttagttagc
ttgataattgatgacaaggatgtcaactttattatcaacagcattgcatcttatgagatg
tacgacgctgtttctgtgcaagaaaagaagaaactacatgttattggtcgcattctctat
atttttgccaagacttccattccttcctgcaatgccgtgtttcaaagtcttttactaaga
atgatggatagtttgggattttctgttagtaacattgatggcctgaaaaatgctggtatt
ttagcctcacaaagtgtcaactttgggttcctttatctctgtatagaactactagcagga
tgcagggaattagttattttgtctgaggaaaagcctgggacatgtttcaccatacttcat
agttcctcagatttcttatttaattccttctgttcagtcttagctgtaagtgctgacaga
ttcccccctgatcctgatatatacattggagtgaagggcttgcagattctggcaatgttt
aatttagatgtttttccaataccaaaatcaacatttgagaatattttgaagaaattcatg
tcaatcatcattgaggatttcaacaaaacaatactatggaattccacattgaaatcatta
tttcatattggctcattgtttcaaaacttcagcgagtctgaaaaagctatgagctacagg
agttttgttttagacaaaaccatggaactgctctctcttgatgatatttctctgcctttt
tcactcaaattagaagtattatctgatattggcatgactagcatgaaaaatatgctaaaa
attcttcaagggctggaaggagctatatttgccaatctttctgaggtccatagaaattta
acgtcttatgatactgctgttcagcttttggagtgctattcatgcaagctacttccgtgg
atccttgaaaatggaggtgcagaggagttcatactgcaattttctgttgatatttggaac
caggcaggaaattgcatggattttaattctccatttgaagaaaagggtctacttgatgca
acaatgaaagcgatgaaattttctgttgggtgttgctctgaagagagtcaaaatgttata
attctgaaatcttacagtatactatcatcacgtaccaattttcagcttaatgatgttcaa
agattgccattaacttttgaaaaatatgacatctcccttagggatgaagggatactttta
ttatttgcatcagtaattattgcacttcgccccaaaacacacgttccaaatataagaggg
attttgcatctttttataataaccctcctcaagggtgttgttccagttgcacaggctttg
ggctctatggtcaacaaactcatttcaaaatccaatggtgcagagaagtctgatgaactt
accttggaagaagctcttcatattatattcaacacaaaaatatgcttttcttctgataat
atgttgcagatatgtgatggatcaattaataggaatgaaattgttcttactgacgtatgt
ctcggcatgacaaatgatagactacttcaaaccaatgcagtttgtgggctctcatggatt
ggaaaaggtttactgttgcgtggtcatgaaaagattaaagacatcactaagatacttaca
gagtgcttaatatcagacagaaatagttccttgcctttgattgaaggtttagatgaaaat
aatgaagagcataaaggggatcatttggcaagaaaatgtgcagcggacgcttttcatgtt
cttatgagtgatgctgaagattgtttgaaccgaaaatttcatgccacgatgcggcctctt
tataagcagaggtttttctcttccatgatgcccatctttctgcagttgatctcaagatct
gattcttcatcgtccagatatttattattacgagcctttgcacgtgtcatgtctgtcact
ccactgattgttatactgaatgatgctaaagagctcatatcagttcttctggattgcttg
tctatgttgacagaagatatccaagataaagatatcttgtatggtctgttgttagtttta
tctgggatgttgacagagaaaaatggacaagaagcagtcattgagaatgcacacattatc
atcaactgtctaattaaacttgtggactactctcataagacgcttgttcgggagagttgt
attcaatgtcttgttgcattgtctaaacttccccatgtgcgtatctatccattgagaaca
caggttctagaagcaatatcaaagtgtcttgacgatacaaagagatctgttcgcaatgaa
gctgtcaaatgtcggcaagcatgggcatcaattgcatcatccaggagtcttcgattttga

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