Medicago truncatula (barrel medic): 11433384
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Entry
11433384 CDS
T01716
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11433384
03036 Chromosome and associated proteins [BR:
mtr03036
]
11433384
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
11433384
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
11433384
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
11433384
microRNA pathway
RISC loading complex
11433384
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
11433384
NCBI-ProteinID:
XP_024639674
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All DBs
Position
5:39310794..39318254
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AA seq
908 aa
AA seq
DB search
MGSQENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKVPMARRGLGSKGAKLPLLTNHF
KVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYGSELNGKDLAYDGEKTL
FTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDTDRKRLKKSHRSKTYKVEISF
ASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVG
GGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFLIANQNVRDPFSLDWNKAKR
TLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKI
SLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMR
VLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNN
KKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFDCFEENGQFRRAPPL
VRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQ
YLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVV
SSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNI
IIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNV
PPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVY
QRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDS
VCNSMFFV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacaggagaacgaagaatgtttacccccgccacctcccattgtcccagcagac
attgaaccaatcaagattgagccgcagatagttaagaaaaaacttcccaccaaggttcca
atggcaagacgtggacttgggtctaagggagctaaactgcctctgcttactaatcacttt
aaagtgaatgttaccaacactgatggttatttctttcagtacagtgttgctcttttttat
gaagatggacgccctgttgaaggaaagggtgctggtaggaagatacttgatagagttcaa
gaaacttatggttccgagcttaacgggaaagaccttgcttatgatggggagaagactctg
tttactattggctcacttgctcagaacaagcttgaatttactgttgttcttgaagatgta
acttcaaacaggaacaacggtaatgctagccctgatggacacggaagtccaaatgatact
gataggaagaggttgaaaaaatcacaccgatcaaagacctacaaagttgaaatcagcttt
gcctcaaagatccctctgcaggccatcgccaatgccttaaaagggcatgaaactgagaat
tatcaagaagcgattagggttcttgacattatcttgaggcaacatgctgccaaacagggc
tgtctgcttgtccgccaaaactttttccacaatgatccgaaaaatttcacagatgtagga
ggtggtgttcttggatgcagagggctgcattctagcttcaggaccacacaaagtgggctg
tctttgaatatagacgtgtcaacaaccatgattgtccatcctgggcctgtggttgatttc
ttgattgcaaaccagaatgtgagagatcctttcagtcttgactggaataaggctaaaagg
actctaaagaatttgaggatcactactagcccaaccaaccaagagtacaaaattactggt
ttaagtgaaatgccatgcaaggaccagctgtttactctgaagaagaggggtgctgttcct
ggagaagatgataccgaggagatcactgtttatgattattttgtcaaccgcagaaaaatt
tctctacagtactcagctgatctgccatgtattaatgtgggaaagccaaagcgacctaca
tttgtcccagttgagctttgctcattggtatcccttcaacgatataccaaagccctgtcc
acactccagagatcctcccttgtggaaaagtctaggcagaagcctcaagagcggatgagg
gtcttgacggatgccttaaaaacaagtgactatggctctgaacccatgctacgtaactgt
ggaatttcaataacatctgggttcacacaagttgatgggagggttttgcaggctccaagg
ttgaagtttgggaatggcgaagacttcaatcccaggaatggtagatggaacttcaacaac
aagaaaattgtgcaacctgttaaaatagagaaatgggctgtggtgaacttttctgcgcgt
tgtgatgtgcgaggacttgtgagggatctgataaaatgtggaggaatgaaaggaattcat
gttgaacagccttttgattgctttgaagaaaatggccagtttaggcgtgcaccacctctg
gtccgtgttgaaaaaatgtttgaacatgttcagtccaaactacctggtgctcccaagttt
cttctttgtctcctttctgagagaaagaactctgatctttatggtccatggaagaaaaag
aatcttgcagagtttggaattgttactcagtgtatagctcctaccagggtgaacgaccag
tatctgaccaatgttttgctgaagatcaatgcaaagcttggtggcatgaattctctttta
ggcgttgaacactctccatccattcccattgtgtcaaaagctcctactctaattttgggc
atggatgtttctcatggttcacctgggcaaactgaaattccctcaattgctgcggtcgta
agctcaaggcaatggcccttgatatctaaatatagggcatgcgtccgtactcagggtgct
aaggttgaaatgattgacaatctgttcaagccagtgtcagatacggaggatgaaggaata
ataagggagcttttgattgatttttataatagttctgggaacagaaaaccagacaatatc
ataattttcagggatggtgtcagcgagtctcagttcaaccaagttttgaacattgaactg
agccaaatcattgaggcctgcaaatttcttgatgaaaagtggaaccccaaatttctggtt
attgttgcccagaagaatcatcacacaaagttcttccagcctggatctccggataatgtg
cctcctggtactgttgtggacaacaaaatctgtcatccccggaattatgatttctacatg
tgtgctcatgctggaatgattggtaccagtaggccaactcattatcatgtccttttggat
gagattggcttttctccagatgatcttcaagagcttgtgcactctctctcctatgtttat
cagcggagcactactgccatctctgttgttgctccaatctgctatgcccatttggctgct
tctcaagtgggacagttcatgaagtttgaagacaagtctgaaacttcatctagccatggt
ggtagcggtcgtgatatcaatgcctctcccatcccacagttgcccaaattgatggatagt
gtctgcaactctatgttctttgtttga
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