Medicago truncatula (barrel medic): 11433720
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Entry
11433720 CDS
T01716
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11433720
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
11433720
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
NB-ARC
RsgA_GTPase
Dynamin_N
MeaB
FeoB_N
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
11433720
NCBI-ProteinID:
XP_003610849
UniProt:
G7K6G9
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Position
5:1477930..1482116
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AA seq
396 aa
AA seq
DB search
MAGPEPSPSPKILLAKPGLVTGAPISGKFNRSGAGEDDSTQHRSRLPSVASLNLLSDSWD
FHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPFTIQSEENRAM
ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLM
GIQLAVFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASSLSQNSSSGHD
SDNKVPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSSFVGENTGKKPSNHV
PPSMVHGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRPVS
EREWLKNSAKIWEQVKKSPTILEYCRTLQHSGMYRR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacctgaaccctctccatctccaaagatccttctagcaaagcctggactcgtc
accggagctcctatctccggtaaattcaaccgctccggcgccggtgaagatgattctact
cagcaccgttctcgtcttccttccgtcgcatccctcaaccttctctccgattcatgggat
ttccacttcgaccgctttctcccttttttgactgaaaatactgatttcactgtgattggt
gtgattggctcacccggagttggcaaatctagtatcatgaatgaactttatggctttgat
tcaacttctcctgggatgctaccaccttttaccatacaatctgaagaaaatagagctatg
gcaagacattgttctactggcattgaacctaggatatcggctgaacgtatcatacttctt
gatacacagcctgtatttagtgcttctgttttagctgagatgacgagacccgatggctct
tcaacaatttctttgctgaatggagaatccttatcagctgaattagctcatgaccttatg
ggtattcagcttgctgtttttctagcatctgtatgtcatattctgctggtggtgtcagag
ggaatccatgatgatagcttgtggcatttgatgtcaacggttgacttgttgaagcatggc
atttcagacccatctttgctcgcttcgtccctttcacagaactctagctcagggcatgat
agtgataacaaggttcctgaatttgaatacatggctactcctgtttttgtacataccaag
ctacaagatcaagagtttactcctaaaaattgtttgcagctgaggaaggcactcatgcag
tatttcaaaccatcctcttttgttggagagaacactggaaagaagccaagcaaccatgtt
ccaccttccatggttcatggaagtcccttggattctgacacactaaatttgtttacgatc
ccatttaagaaaaaagaggaaaatccaagagctcagcatgagagttacatttctgctcta
tggaaattacgggatcagattttatccatgaagtctccatctttcaggagacccgtgtct
gagcgcgaatggttgaaaaattcagccaagatatgggagcaggttaagaaatccccaaca
atattggagtattgtagaacccttcaacactccggcatgtataggaggtag
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