Medicago truncatula (barrel medic): 11433942
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Entry
11433942 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11433942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11433942
03036 Chromosome and associated proteins [BR:
mtr03036
]
11433942
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11433942
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
11433942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
11433942
NCBI-ProteinID:
XP_003618002
UniProt:
G7K4Y8
LinkDB
All DBs
Position
5:44059011..44066163
Genome browser
AA seq
1022 aa
AA seq
DB search
MESDVGGVCDSSTVLSYKKRRVSECYVTRSNKTMTKIEASLPILHSPGYYTEPSLKDLAA
REVLYPGYCSSVPDFTVGRFGYGYIRYVNETDVRGLCLDDIVKFHKNEVIVYEDENNKPV
VGQGLNKAAEVVMVLNSRKLKSKECRNDVLVKKLKQSTESQGARFVSFDLVTCELKILVE
HFSRFGFDDDDEEDAVMDDAETHDVEKELPINVDEIELSHSLPAHLRLDPVKMREMRSLM
FPDEEEMEDLGRKSSFGKESVRPLKNSAQSAMNRSTPPTVRNTPFPLLEYKHGNLESNSP
GSILMVQQHKNMPLRAVKAQGFKLDLKQETPISGSYAHNIVDAGLFMGKSFRVGWGPNGI
LVHSGTLVGSGGDHKLMSSVVNLEKVAFDNLVRDENKKVCEELVDHALVSPLNFHKGINH
VTKEVDVGPYKLTLQKLEANRTDLPEISHQYCDIIERQMSVPGLPSWNRLGLTHQVMTWE
LIRVLFSERKQKGQIESLGADNEEDMMEDIKEVDNDVDQEALPLIRRAEFSYWMRESVSY
HVQNQISSLNDSHYLQHVFTLLTGRQLDEAVQLAVSNGDVRLACLLSQAGGSTLNRSDIA
KQLDIWRNKGLDFNFIEEDRLRLYELLAGNIHDALHDIQIDWRRFLGLLMWYQLPPDTSL
PAAFETYKHFLDEGTAPYPVPLYIDEGTSEEVVSLKADKHFDISFYLMLLHAKEDTEFSF
LKAMFSAFSSTPDPLDYHMIWHQREVLEAVGVINSNDLHILDMGFVSQLLCLGKCHWAIY
VALHLPHREDYPFLHVNLIREILFQYCETWSSDESQYHFIVDLGIPKEWMHEALAIYYNY
NGDLAEALEQYLQCANWQKAHTIFVTSVAHKLFLQAKHSEIWRIATSMEDYKSEIENWEL
GAGIYISFYSMRNSLQGDANTMTELDSLQSKNAACQDFVSQLNESLAVWGYRLPIDARVV
YSKMASQICDLLLSAVGEGASRDEQFGCFNTAFSAPIPEDLRSGHLQDAVYLFTSYLSEI
AT
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgatgtcggaggtgtctgtgattcttctactgtgctaagttacaagaaaaga
agggtttctgagtgctatgttactcgttcgaacaagaccatgaccaaaattgaagcttca
ttgccaatactgcactctcctggttactacactgaaccgtctttgaaggatttagcggcc
cgtgaagtcctttaccccggctattgcagcagtgttccagatttcactgttggaagattt
ggttatggatatattaggtatgtcaatgaaacggatgtacgaggattatgtttagatgac
attgtgaagttccataagaatgaggttatagtttatgaggatgaaaataataagcctgtt
gttggtcagggtcttaacaaagcagctgaagtggttatggtactgaatagtagaaagttg
aagtctaaggagtgtcggaatgatgttctggtgaaaaaattaaaacaaagtacagagagt
caaggagcacggtttgtgtcattcgatctggtaacttgtgagttgaaaatcttagttgaa
cacttcagtagatttgggtttgatgacgatgatgaagaggacgctgttatggatgatgct
gagacacatgatgttgagaaagagttgccgataaatgtcgatgaaattgagctttctcat
tctcttcctgcccatcttaggcttgatcctgttaaaatgagagaaatgagatcattgatg
tttcccgatgaagaagagatggaggacttgggtcgcaaatcatcttttggtaaggaaagt
gtgaggcctttgaaaaattctgctcagtcggcaatgaatagatctactccaccaactgtt
cgaaacactccatttccattacttgaatataagcacggaaatctagagtcaaattctcct
ggatccattttgatggttcagcaacataagaatatgcctctgagggcagtaaaagctcag
ggttttaagctggaccttaagcaggaaactccaatatccggaagctatgctcacaatata
gttgatgctggtctgttcatgggtaagtcatttcgagttgggtggggaccaaatggcatt
cttgtacactctggtacacttgtaggaagtggtggtgatcacaagctaatgtcatcggtt
gtcaatttggagaaagttgcttttgacaatttggtaagagatgaaaataaaaaagtgtgt
gaagaacttgttgaccatgctttggtttctccattaaattttcacaaaggaataaaccat
gtgacgaaagaggttgatgttggtccctacaagttaactcttcaaaagctcgaagctaat
cgtacagacctgccagagatttctcatcaatactgtgatattattgagagacaaatgagt
gtgcctggcttaccttcctggaaccgattaggtttgacacaccaagtaatgacctgggag
ttaattagagttcttttttctgagagaaaacaaaagggtcaaatagaatcattaggcgct
gacaatgaggaagatatgatggaggatataaaggaagttgataatgatgttgaccaagaa
gcactacctcttatcagaagagcagagttcagttattggatgcgagagagtgtctcctat
catgtccaaaaccaaataagctctctaaatgactctcactatttgcaacatgttttcaca
ctcctgactggacggcaattggacgaagcagtgcagttggctgtgtccaatggagatgtg
aggctggcttgtttgttaagtcaggctggtggttctactctgaatcgctctgatattgca
aagcaacttgatatttggaggaataaaggccttgatttcaatttcattgaagaagacaga
ttgagactctatgaactgcttgcgggaaatattcatgatgcattgcatgatatccaaatt
gactggaggaggttcttaggtttgttaatgtggtaccaattacctcctgacacttcgtta
ccagctgcttttgagacttataaacattttcttgatgagggaacagctccatatcctgtt
ccactttatattgatgaaggaacatctgaggaggttgtcagtttgaaagcagataaacac
tttgacatttcattttatctcatgcttcttcatgctaaggaagatacagaattcagtttt
ctgaaggctatgtttagtgccttctcgtcaacccctgatccacttgactatcatatgatc
tggcaccaacgtgaagttttggaagcagtgggtgttatcaattctaatgatcttcatatt
ctagacatgggatttgtgtctcagctgttgtgcttagggaaatgtcactgggccatatat
gtggcccttcacttgcctcatcgggaagattatccatttcttcatgtaaatctgattcgt
gaaatattgttccaatactgtgaaacttggagttcagatgaatctcagtatcatttcatt
gtggatttaggcattcccaaagaatggatgcacgaggctttggcaatatattacaattat
aatggggatcttgcagaagcccttgagcaatatcttcagtgtgcaaattggcagaaagct
cataccatctttgtaacttcagttgctcataagttattcttgcaagccaaacattctgag
atatggaggattgcaacttccatggaggactataaatctgaaattgaaaactgggagttg
ggagctggaatttatatttcattttattcaatgagaaactcacttcagggagatgccaat
accatgactgaattggattctcttcaaagtaaaaatgctgcatgtcaggattttgtcagt
cagttaaatgaatctttggctgtttggggttacagattacctattgatgcaagagtggtg
tattctaaaatggcaagccagatatgtgacttgctgttatctgctgtcggtgagggtgcc
tcacgtgatgagcagtttggttgctttaacactgctttcagtgctcccattcctgaagac
ctacgatccggtcacttgcaggatgcagtgtatctgtttaccagctatttgtcagagatt
gcgacttaa
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