Medicago truncatula (barrel medic): 11434133
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Entry
11434133 CDS
T01716
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11434133
03015 mRNA surveillance pathway
11434133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11434133
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
11434133
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
11434133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5815
Phage_186_Dhr
Motif
Other DBs
NCBI-GeneID:
11434133
NCBI-ProteinID:
XP_003590425
UniProt:
G7IA59
LinkDB
All DBs
Position
1:31011683..31018612
Genome browser
AA seq
491 aa
AA seq
DB search
MSEPSTTSPPPPTTKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSLSKSLDDP
DDSNITAVTAGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHR
DLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGIS
SECAVPMDRRDSIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLA
EDGFRDDSLRIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSL
DAVKQYKVLVPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTS
IQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGH
EQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDY
KVALKEAGLLF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccttccaccacctctcctccaccgcctacaaccaaaagctgggccgatcaa
gccgatgaagaaaccaatcaaacctccacctccgccgccgacgaaacatcttccctcaac
gtcaatgaattaaccatcgacgaagaaaacaaatccctttctaaatctctagacgatccc
gacgactccaacattacagcggttacagctggagacactccttacacatccgcgacgacc
ttcgaagaattatctctctcgccggagcttttgaagggattatatgtggagatgaagttt
gaaaaacctagcaaaattcaagctaagagtttgcccatgattcttaatcctccacatagg
gatttgattgctcaagcacataatggttctggaaaaactacttgttttaatcttgggatg
cttagtagggttgatcccaatttgcaagctcctcaagctctatgtatttgtcctactaga
gagttggctattcagaacattgaggttctccgtaagatggggaagtacacggggattagc
tcagaatgtgcagttcctatggacagaagagattcaattccggtaatgaaaagggcgcct
attatggctcaggttgttattggtactcctggcacaatgaagaatttgattacttataag
aaacttggagtgacaaaattgaagattctcgtttttgacgaggcggatcaaatgcttgct
gaggatggatttagagatgattctctgagaataataaaagaaatagagaaattcaattca
agctgtcaggttcttctgttttctgctacatttaatgaaactgtcaagaattttgctaca
agggttgttgggaaaaaggagcataatgaactttttgtgaagaaagaggagctatcttta
gatgcagtaaaacagtacaaagttcttgttcctgatgagcttgttaaaattgacgtgatt
aaaaattatatatttgaactaggagagaatgtggggcaaactattatatttgtgcgcact
agaaatagtgcaaaaatgttgcacaaagctcttgttgatttaggctatgaggtcacttcc
atacaaggtgctcttgaccatgttgatagagacaaaatcgtcaaagagttcaaagatggt
ttgactcaggttcttatatcgactgatgttcttgcccgtggctttgatcagcaacaggtt
aatttggttataaactatgatcttccactgaagtacgctgctgagtacacccatggccat
gaacaagagcctgattatgaggtgtatttgcacagggttggtagggctgggcgatttggg
cgcaagggggctgtatttaacctgatatgtggtgaaagggatgaaaagaccttgtcaaag
attgaaaaacattttggcacctatataaaagaggtgaaagacagaagtgttgaagattat
aaagttgctcttaaagaagctggtttactgttttga
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