KEGG   Medicago truncatula (barrel medic): 11434250
Entry
11434250          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    11434250
   04120 Ubiquitin mediated proteolysis
    11434250
  09126 Chromosome
   03083 Polycomb repressive complex
    11434250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11434250
   04121 Ubiquitin system [BR:mtr04121]
    11434250
   03036 Chromosome and associated proteins [BR:mtr03036]
    11434250
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    11434250
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     11434250
   Cul7 complex
     11434250
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     11434250
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     11434250
SSDB
Motif
Pfam: Skp1 Cas_Csm6_6H
Other DBs
NCBI-GeneID: 11434250
NCBI-ProteinID: XP_024636209
LinkDB
Position
4:complement(11651052..11651522)
AA seq 87 aa
MVIEYCKKHVDAASSDELEKWDAEFDKIDQDTLLKLILAANYLACLTTANNIKDKTPEEI
RKIFNIKNDYTSAEKEEVRRENSWAFE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggttattgagtattgcaagaaacatgttgatgctgcaagttctgatgaacttgagaag
tgggacgctgaatttgacaagattgatcaagatactctcttgaaactcatcttggctgct
aattatcttgcatgtttgactacagcaaacaacatcaaggacaagacaccagaggagatt
cgcaagattttcaacattaagaatgattacacctccgcggaaaaggaggaagttcgtcgc
gaaaatagttgggcctttgaatga

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