Medicago truncatula (barrel medic): 11434412
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Entry
11434412 CDS
T01716
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X2
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00500
Starch and sucrose metabolism
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
11434412
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mtr01003
]
11434412
Enzymes [BR:
mtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
11434412
Glycosyltransferases [BR:
mtr01003
]
Polysaccharide
Storage polysaccharide
11434412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
DUF4107
ZnuA
Motif
Other DBs
NCBI-GeneID:
11434412
NCBI-ProteinID:
XP_003612925
UniProt:
G7KF48
LinkDB
All DBs
Position
5:complement(12956186..12965012)
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AA seq
675 aa
AA seq
DB search
MVALLNSTMPILGIPSSFLQKPISLPALSCFRNNGDVSGLHEQRLEVNKNEDISKSLSDD
GQNVKHDNIWQLFREAQQNILYLNNQRLGAIEELNKIKKEKQSILDKIKKLEAVKQESAD
KLSICSELLLRIDSMVLGNVISLAEASDFRSLVLHHKVSVADVFNVISHKRDSELVGELR
HFSDQSKKNGFHIIHICTEMTPLVSRGSVASYVTGIARALQRKGHLAEVILPKYACLDLD
EVQGLREVNVEVYSYFNGQLHGNRIWTGVVYGVGVTLIEPLDHSSFFSREMIYGYPDDFE
RFSYFCRASLDYIVKCGKQPDILHLHNWETAIVAPLFWDVFVNKGLGGTRILLTIHNFNS
QGTEQPDKLALCGLDPSSLHCPDRLQDNTNTQLVNILKGGVVYSNRVVIMSSIHPKHAII
RNLSNELEPTLNVHGDKLSVAPYGFEKSTWDPQTDYFLPENFNAENMNGKAVCKVALLQR
LGLSEHSSTILVGCSFSEGADIDEKKMKDIVLNAKKHDVQFIFMETSERPDLNQALESLH
MEFKDDDNIKFVRSYDEALSHLLFAGSDSILCRSFHDPTDETPLKALRYGAVPIAVDSDS
HTNRNFINHDQEATKYSKLINNTFGNMSLGLAIDELRSNPSKWKRRIMEAMAHDLSWDGE
CYEVHVAAYSAIKNM
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtggcattgttgaactcaactatgcctattttgggaattccctcctcttttcttcaa
aaacccatttcacttcctgctctttcttgtttcaggaataatggagatgtcagtggctta
catgaacaaaggttagaggttaacaaaaatgaggacatttccaagtcattatctgatgat
ggccagaatgtgaaacatgataatatttggcaattgttcagagaagcacaacaaaacata
ctatacttaaacaatcaacgcctaggtgccatcgaggaacttaacaaaataaagaaagaa
aaacagtccatacttgataagataaaaaaattggaagcagtaaagcaggagagtgctgat
aagctatcaatttgttccgaattgctgcttcgaatagactcaatggtcctgggcaacgtg
attagccttgcagaggcatctgactttagaagtttggtgttgcaccataaagtgagtgtt
gctgatgtctttaatgttatctcacataaaagagattctgaactggtgggagaacttcgt
cacttctcagatcaaagcaaaaagaatggctttcatattattcacatttgcacagaaatg
acaccattggtctctagaggatctgtagcatcatatgtcaccggcatagctcgtgcactt
caaagaaaaggtcaccttgcagaggttatattgcccaagtatgcatgcttagacctagat
gaagtgcaaggtttgcgtgaagttaatgtggaggtttactcatattttaatggtcaatta
cacggaaacagaatttggactggtgttgtttatggcgtgggagtcactttgatcgagcca
ttggaccattcatcgtttttcagccgcgagatgatatatggttacccggatgattttgaa
aggttctcatacttttgtcgtgcctcactggattatatagtaaaatgtgggaagcagcct
gatatactgcatctacataactgggagactgccattgttgcccctcttttctgggatgta
tttgtaaacaagggacttggaggtaccagaatattactgacaatccacaacttcaattca
caaggtaccgagcaaccagataaattggccttatgtggactcgatccttcaagtcttcat
tgtcctgatcgtctgcaagacaacaccaatacacaacttgtcaatattttgaagggggga
gtagtctattcaaacagagttgtaataatgtcttctatccatccaaagcatgcaattatt
cgtaatttgagtaatgaactagaacccactttaaacgttcatggggacaagttatccgtt
gctccttatggatttgagaaatcaacatgggaccctcaaacagactattttcttccagaa
aattttaatgctgaaaatatgaatggaaaagccgtttgcaaagttgcattgctgcagcgg
ctcggattatctgagcattcttctactattcttgttggatgcagtttttcagaaggagct
gatattgatgagaaaaagatgaaggatattgttttgaatgctaagaagcacgatgtccag
tttatatttatggagaccagtgaaagaccagacttgaatcaggcactagaatcacttcat
atggaattcaaggatgatgataatattaaatttgtgcgttcgtatgatgaagctctatcg
catttattattcgcaggatcagacagtatattatgtcgatcttttcatgatcctactgat
gaaaccccactcaaagctttaaggtatggagcagttccaatagcagttgactctgattct
cacacaaacaggaacttcataaaccatgaccaagaggcaactaagtactcaaagttaatc
aataatacctttggaaacatgtcacttggccttgccattgatgagcttaggagtaaccca
tccaaatggaagcgaagaataatggaagcaatggcacatgatttatcatgggatggtgaa
tgttacgaagttcatgtggcagcttactcggctataaagaatatgtga
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