Medicago truncatula (barrel medic): 11434621
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Entry
11434621 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11434621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11434621
03036 Chromosome and associated proteins [BR:
mtr03036
]
11434621
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11434621
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
11434621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
11434621
NCBI-ProteinID:
XP_003588386
UniProt:
G7IB50
LinkDB
All DBs
Position
1:complement(134767..146115)
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AA seq
710 aa
AA seq
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MSPNTVDNGTLIPFSGETNNDSLAIYPLHHTLTRPVSRLAISWSRGNSLRVSLFAEPSQT
SDAGDGAKVIEVKLGGGDPEIDDADWRRIAYGSVAPFALLQSRRSAISNMSKSPSTYQLD
WWEHVLQYSKEITSLLAGPKLGPSPIIDDPNEIVKKNEEPTCLKAAWELMEIFYVDKQSQ
AWLPERLVDWLADYDSLFTSTQETIHGKLVDFQNDLVNIQVIEDDPRYWEVMSSALSVGW
LDIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRLRPESAAGNLGECFKSKPD
FIKAWEKWRSQITKLDCSPFWIQCDNQQTRVGLRNLLQVMLGNTESLCTASCYWVELYIS
HFLYIRPFMIGVESMYNLAQKCIQLKPPTGTHRLTGLLIGILGENTEVVLAEISREFGPW
MVAHAVELLTAGSEQAEILLYDERYNLGGISMVELHRLAYAQVLSSHALTWQIAPIYLTS
CMKQGMGLLENLLYRQSVQHNNMLLKNIEICRLYELDHISSNIMKVAGVYHWKHGRKGAG
VFWLQQSQDTNCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYR
DFKKSLQMVYSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLFDSLKLLNWKDSPLLSV
SETNLLLNKLQEFSLARQRPHFTEPNLPPQALSSIRLALATNLGRAILDE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctaacaccgtcgacaacggaaccctaatcccattctccggcgaaaccaacaac
gattctctcgcaatctaccctctccaccacactctcacccgtccagtttctcgccttgcc
atctcctggtcccgcggcaactccctccgtgtctccctcttcgccgaaccttctcaaacc
tccgatgccggagacggtgccaaagtcattgaagttaagctcggtggtggagatccggag
attgatgatgctgattggcgaagaattgcgtatggatctgttgctccgtttgcgttgctt
caaagtcgccgcagcgcgatttcaaatatgtcgaagtctccttccacgtatcagttagat
tggtgggagcatgtccttcaatatagcaaggagataacatcgcttcttgcagggccaaag
ttgggccctagtccgataattgatgacccaaatgaaattgttaagaaaaatgaggagcca
acatgtttgaaagctgcatgggagttgatggaaatattttatgtggacaaacaatctcaa
gcatggctacctgaaaggcttgttgattggttagctgattatgatagcctctttaccagt
acacaagaaacaattcatggcaagctagtggattttcagaatgatcttgtcaacatacag
gttattgaggatgatcccagatattgggaagtgatgtcatctgcgttgtcagttggttgg
ctagatatagtggtgaaaatgttgcggttgcatggatcttaccaattagatcagctcagc
aaccgtgagttagaaaatggattagtggaggcagttgctgttcttatttccaaaatgcct
cgattacgtcctgaatctgctgctggaaatttgggagaatgctttaaatccaagcctgac
tttatcaaagcctgggaaaaatggaggtcacaaattactaaactggactgcagtccattt
tggattcagtgtgataatcaacaaactcgtgtgggcttaagaaacttgctacaagttatg
ctgggtaacactgagagcctctgtacagcttcatgttactgggttgagttgtatatttct
cattttctatacatcaggccatttatgatcggagtagaaagcatgtataatttggcccag
aagtgcatccaattgaaaccacctactggtacccataggttgactggacttttaattgga
attcttggagaaaatacggaggttgttttagcggaaatttccagagaattcggtccttgg
atggttgcacacgccgtggaattgttaactgcagggagtgagcaagcagagattcttcta
tatgatgagcgttataacttggggggaatcagtatggtggaacttcatcgccttgcatat
gctcaagttctatcatcacatgcattgacctggcaaatagctccaatatatttaacatcg
tgcatgaagcaaggaatgggcttgctagagaatttattgtaccgacaatctgttcaacac
aacaacatgttgcttaagaacatcgagatatgccgcttatatgagcttgatcatatcagt
tcaaatatcatgaaggttgctggagtctatcactggaagcatggtcgtaaaggtgctgga
gtattttggcttcaacaatcccaagatacaaactgtcttgataggattgcacaacagtta
tttgattcagttggaaagtcaatctccgacgaaagcttcaaacaatgggaaggcttaatt
gagttattgggatctgaatctaagcctgctggaggtcttgagtttttacacaagtataga
gatttcaaaaaatcccttcagatggtatatagtggaaaatcgactgatgctgctagacaa
gctgtaggctccctcatactgcttatgaaaaatccatcaacccctcagcgcttttggctg
ccccttctgtttgactcgttgaagttgctaaattggaaagatagtcctcttctcagtgta
tctgagacaaatcttctattaaacaaacttcaagagttttctttggcgaggcagcggccg
cacttcactgagcctaacttacctcctcaagcactgagttctattaggctggctctagct
acaaatcttggccgtgctatacttgatgaatag
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