Medicago truncatula (barrel medic): 11434840 Help Entry 11434840          CDS       T01716                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism mtr  Medicago truncatula (barrel medic) Pathway mtr03040   Spliceosome Brite KEGG Orthology (KO) [BR:mtr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     11434840  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mtr03019]     11434840    03041 Spliceosome [BR:mtr03041]     11434840 Messenger RNA biogenesis [BR:mtr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      11434840 Spliceosome [BR:mtr03041]  Complex B   Other components    Prp19-related factors     11434840  Complex C     11434840 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 ARM_TT21 TPR_MalT Motif Other DBs NCBI-GeneID:  11434840 NCBI-ProteinID:  XP_003593448 UniProt:  G7ILD9 LinkDB All DBs Position 2:3032150..3038660 Genome browser AA seq 925 aa AA seqDB search MAAISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERALKALPGS YKLWHAYLRERLEIVRSLPITHSQFETLNNTFERALVTMHKMPRVWIMYLQTLTQQKLVT RTRRTFDRALCALPVTQHDRIWEYYLFFVSQKGIPIETSLRVYRRYLQYDPNHIEDFIEF LINSSLWQESAERLASVLNDDKFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRG GIRKFSDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYLQFEESM LAYKMEDMDMSDEEDEENEDGMKEKEDEDEDVDVRFKFDVDVDKKEFVKEFKKNVLSGFW LNDKNDIDLRLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTE AVRTVDPMKAVGRPHTLWVAFAKLYEEHNDLANARVIFDKAVQVNYKTVDNLASVWCEWA EIELKHENFKGALDLMRRATAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFFVDLEESL GSLESTREVYERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIW VTYLSKFVKRYGRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYD QATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELER SLGEIERARGVYVFASKFADPRSDPDFWNDWHEFEVQHGNEDTFREMLRIKRSVSASYSQ THFILPEYLMQKDQTVNLEEAKDKLKEAGIPEDEMAALERQLAPAVDKAVTKERKVGFVS AGVESQSDGGIKTNANHEEIELPEENDSDDDDIEIAQKDVPSAVFGGLVRKRDEIENNEV DDGAKEKDNESRLGALERIKKLKRN NT seq 2778 nt NT seq  +upstreamnt  +downstreamnt atggcggcaatttcatccgatctctacccatcagaagacgatctcgtctacgaagaagaa cttctccgtaacccattcagtctcaaactatggtggcgttaccttatcgcacgttccgat tcacctttcaaaaagcgctttatcatctacgaacgcgctttaaaagcacttcctggaagc tataagctctggcacgcttaccttcgtgaacgactcgaaatcgttcgaagcctcccaatc acacattcccaatttgaaacgctcaataacacgtttgaacgtgctcttgttactatgcat aaaatgcctagggtttggattatgtatcttcaaaccctcactcaacagaagcttgttacc agaacgcgaagaacttttgatagagctttatgtgctcttcctgtgacacagcatgataga atttgggagtattatttgtttttcgttagtcaaaagggtattcccattgaaacctcgctt agggtttatcgtaggtatttgcagtatgatccgaatcatattgaggattttattgagttt ttgattaattcgagtctttggcaagagtctgctgagagattggcatctgttttgaatgat gataaattttattcgattaaggggaagacgaaacataggctttggttggagttgtgtgat ttgctgactaggcatgcgaatgaggtgtcggggttgaatgtggatgccattattaggggt gggattaggaagttttcggatgaggttggtcggttatggacttcgcttgctgagtattat attaggaggggtttgcatgagaaggctagagatgtgtttgaggagggtatgtcgactgtt attactgtgagggattttagtgttatatttgattcgtacttgcaatttgaagagagtatg cttgcttataagatggaggatatggatatgagtgacgaagaagatgaagaaaatgaagat gggatgaaggagaaggaagatgaggatgaggatgtagatgttcgtttcaaattcgatgtg gatgttgacaagaaggaatttgtgaaggaatttaagaagaatgttttatctgggttttgg ctgaatgacaagaatgacattgacttgagattggcccggtttgactacctaatggagagg aggcctgaattggctaatagtgtgcttttgcgtcaaaacccacataatgttgaacagtgg caccggagggtgaagctttttgagggtaatccgactaagcagattctcacttacaccgag gctgtgaggactgttgatcccatgaaagcagtgggaagacctcatacgttatgggtggct tttgcaaagctttacgaggagcacaatgatcttgccaatgctcgtgttatttttgacaag gcagtgcaggtgaactacaaaactgtggacaatctggctagtgtttggtgtgagtgggct gaaatagagttgaaacatgagaatttcaaaggagcacttgacctaatgaggcgggctaca gcagagccatcagttgaggtcaaacgaaaagtggctgctgatgggaatcaaccagttcag atgaagctgcataaatctttgagattgtggaccttttttgttgatttggaggaaagtcta ggtagtttggagtctactcgggaagtttatgaacggattttggatttacgaatagccaca ccacaaataataatcaattatgcatactttctggaggaacacaaatacttcgaagatgct tttaaggtttatgaaaggggagtcaagatattcaagtacccacatgttaaagatatttgg gtcacatatctgtctaaatttgtgaagagatatggaaggacaaaattggagagagcaaga gagctgtttgagaacgcggttgaaacggccccagctgatcaagtgaaacctctctatctg caatatgctaagctggaagaggactatggactagcaaagcgagctatgaaggtttacgat caagcaacgaaagctgttccaaacaatgaaaagttaagcatgtatgaaatatacattgct cgtgctgctgagatatttggggtacccaagacacgcgagatctatgagcaggcaattgaa tctggtcttccagataaggatgtcaaaactatgtgtttgaagtatgctgaactggaaaga agcttgggagaaattgaacgtgcccgtggagtatatgtatttgcctccaagtttgctgat ccgcggtctgatccagacttttggaatgattggcatgaatttgaggttcaacatggaaat gaggacacttttagagaaatgcttcgaattaaaaggagtgtctctgcaagctatagccag acacattttatactgcccgagtatctgatgcagaaggaccaaactgtgaatcttgaggag gccaaagacaagttaaaggaggctgggatccctgaggatgaaatggctgctttggaaagg caattagccccagcagttgacaaagcagtgacaaaagagagaaaagttgggtttgtaagt gctggagtggaatcacagtccgatggagggataaaaactaatgcgaaccatgaagaaatt gagttaccagaagaaaatgactctgatgacgatgatattgagattgcacaaaaagatgtc ccttctgctgtttttggcggtttggttagaaaaagagatgagattgaaaataatgaagta gatgatggtgcaaaagagaaggataatgaaagtcggcttggtgcccttgagagaattaag aagctgaaacgaaattaa

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