KEGG   Medicago truncatula (barrel medic): 11434844
Entry
11434844          CDS       T01716                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11434844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    11434844
Spliceosome [BR:mtr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    11434844
 Complex B
    11434844
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded SDP_N
Other DBs
NCBI-GeneID: 11434844
NCBI-ProteinID: XP_003593528
UniProt: G7IP17
LinkDB
Position
2:3482093..3491817
AA seq 522 aa
MSDIDNHAYHGASSPDKPSSRGSGHDSTRMRRRDGDRKSFHDHRDRHRDDKYEGFKGRGK
YDSYNRQRGRDYDRHNDYDRDRDTRNRYGAHSKRSRRESRSRSRSRSPSQSEGKRTSGFD
MAPPATGVTPTVSGQMPGIAHMIQGATQNFSPYGISQIGALSLMQVQPMTQQATRHARRV
YVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASN
AMALDGIVFEGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGGAEGLDRI
FVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAALN
GLKMGDKTLTVRRATVSAHSKPEEDNIFARAQQHIAMQKIALEVVGLNIPGVPTNDESPT
KVLCLTEAVTTEQLTDNGEYEEILEDMRDECRKFGTLVNVVIPRPNPNGELSTGIGKVFL
EYSDCTACLAAKNALNGRKFGGSIVTAFYYPEEKYHSMDYDL
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgtctgacatcgataatcacgcatatcacggtgcttcttcccccgacaagccaagttct
cggggatctggtcatgatagcacgaggatgagaaggagagatggagacaggaaaagtttt
catgaccaccgggaccgtcatagagatgataagtatgaaggttttaaaggaagaggcaaa
tatgacagttataatcggcaacgtggccgtgattatgataggcataatgactatgatcgt
gatagagatacaagaaacagatatggagcacattcaaagagatccaggagagaatctaga
tctagatcacggtccagatccccttctcaatctgaaggcaaaaggacctctggttttgac
atggcaccacctgctaccggtgtaacacccactgtctcagggcaaatgccggggattgct
catatgattcaaggagccacacaaaatttctcaccatatgggatatcgcagattggagct
ctttcattaatgcaagttcaacctatgacacaacaggctacaaggcatgctcggcgagtg
tacgttggtgggcttcctccttttgctaacgagcagtcaattgcatctttctttagccaa
gtcatgattgctattgggggaaattctgctggatcaggtgattctgttgtcaatgtctac
attaatcatgagaagaaatttgcgtttgtggagatgagaaccgttgaagaagctagcaat
gcaatggctttagatggaatagtatttgagggtgttgctgtgagagttcgtaggcctact
gactataacccttcgttagctgcagttctaggtccctgccagccaagtgcaaacctcaac
ttatctgctgttggactttctgcaggtacaattggtggagctgagggactcgatcgcatc
tttgtgggtgggctgccatactactttactgaagtacaaatgagagaattgcttcaagct
tttggccctcttcgaagttttgatatagttagggataaagaaacaggaaattctaaagga
tatggtttctgcatctatcaggatccagcagtaacagacattgcttgtgccgctctcaat
ggccttaaaatgggagataaaacattgactgtaaggcgtgctactgtcagtgcacattct
aaaccagaagaggataacatctttgcacgagctcaacagcatatagctatgcagaaaata
gctttggaagtggttgggctaaatattccaggagtcccaacaaacgatgaaagccccacc
aaagttttatgtttaactgaggccgtcactactgaacaattaactgataatggagaatat
gaagaaatattggaagacatgcgggatgaatgccgcaaatttgggaccttggtgaatgtt
gttattcctcgtccaaatccaaacggagagttgtctacaggaattggaaaggtgttcttg
gaatactctgattgtactgcttgtttagctgcaaaaaatgctctaaatggtaggaaattt
gggggtagtattgtgactgctttttattatccagaagaaaaatatcatagtatggattat
gacttgtaa

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